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PLM4_65_b1_redo_sep16_scaffold_19042

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_19042_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..525)
DNA (525bp) protein (175aa)
maleate cis-trans isomerase bin=GWD2_Deltaproteobacteria_55_8 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_19042_2
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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comp(557..1117)
DNA (561bp) protein (187aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000370B629
ATP-dependent protease ATP-binding subunit ClpX
Tax=Caldatribacterium saccharofermentans
PLM4_65_b1_redo_sep16_scaffold_19042_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1350..2096)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DC397
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_19042_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2098..2835)
DNA (738bp) protein (246aa)
3-ketoacyl-ACP reductase Tax=Desulfitobacterium hafniense RepID=UPI0003639C18
3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_19042_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2832..4625)
DNA (1794bp) protein (598aa)
Long-chain acyl-CoA synthetase Tax=uncultured Acidobacteria bacterium RepID=H5SH85_9BACT bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
AMP-dependent synthetase and ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_19042_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4622..5995)
DNA (1374bp) protein (458aa)
Tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase Tax=Pelosinus fermentans RepID=I8RFE2_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_19042_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6074..6886)
DNA (813bp) protein (271aa)
AP4A hydrolase bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 7 items

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