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PLM4_65_b1_redo_sep16_scaffold_9778

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9778_trna_1
unknown

Not on your lists

comp(103..185)
DNA (83bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_9778_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(358..1719)
DNA (1362bp) protein (454aa)
DNA repair protein RadA (EC:2.1.1.63)
DNA repair protein radA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_9778_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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1809..2966
DNA (1158bp) protein (386aa)
8-amino-7-oxononanoate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bioF; 8-amino-7-oxononanoate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_9778_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2969..4327
DNA (1359bp) protein (453aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase; K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_9778_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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4327..5043
DNA (717bp) protein (239aa)
bioD; dethiobiotin synthetase (EC:6.3.3.3) bin=GWC2_NOV_55_46 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_NOV_55_46 organism_group=Proteobacteria
bioD; dethiobiotin synthetase (EC:6.3.3.3)
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_65_b1_redo_sep16_scaffold_9778_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5080..6036
DNA (957bp) protein (319aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein bin=GWD2_CPR2_39_7 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_9778_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6054..7319)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamily protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_65_b1_redo_sep16_scaffold_9778_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7329..8492)
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003753BA4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_9778_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8575..9795)
DNA (1221bp) protein (407aa)
Uncharacterized protein Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J516_NOSP7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 9 items

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