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PLM4_65_b1_redo_sep16_scaffold_6412

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6412_1
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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77..532
DNA (456bp) protein (152aa)
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, inferred for ABFAE pathway {ECO:0000313|EMBL:AEK61733.1}; EC=4.2.1.59 {ECO:0000313|EMBL:AEK61733.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, inferred for ABFAE pathway Tax=Collimonas fungivorans (strain Ter331) RepID=G0AK48_COLFT
PLM4_65_b1_redo_sep16_scaffold_6412_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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525..1250
DNA (726bp) protein (242aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-ketoacyl-ACP reductase Tax=Duganella zoogloeoides RepID=UPI000379C314
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_6412_3
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1247..2476
DNA (1230bp) protein (410aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, inferred for ABFAE pathway {ECO:0000313|EMBL:AEK61734.1}; EC=2.3.1.41 {ECO:0000313|EMBL:AEK61734.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
3-oxoacyl-[acyl-carrier-protein] synthase, inferred for ABFAE pathway Tax=Collimonas fungivorans (strain Ter331) RepID=G0AK50_COLFT
PLM4_65_b1_redo_sep16_scaffold_6412_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3069..3515
DNA (447bp) protein (149aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0002F9EF31
excinuclease ATPase subunit
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_6412_5
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3713..4483
DNA (771bp) protein (257aa)
4'-phosphopantetheinyl transferase (EC:2.7.8.-)
Putative 4'phoshpopantetheniyl tansferase Tax=Collimonas sp. MPS11E8 RepID=E8ZA79_9BURK
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_b1_redo_sep16_scaffold_6412_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4522..5094)
DNA (573bp) protein (191aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6412_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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5235..6563
DNA (1329bp) protein (443aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
sugar phosphate permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6412_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6637..7047)
DNA (411bp) protein (137aa)
id=2114318 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6412_9
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7057..7812)
DNA (756bp) protein (252aa)
Hydrolase bin=GWD2_Deltaproteobacteria_55_8 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta superfamily hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6412_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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7923..8831
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
xerC; tyrosine recombinase XerC
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6412_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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8876..9448
DNA (573bp) protein (191aa)
ATP-dependent protease subunit HslV bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ATP-dependent protease peptidase subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6412_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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9613..10998
DNA (1386bp) protein (462aa)
ATP-dependent protease ATPase subunit HslU bin=GWD2_Deltaproteobacteria_55_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hslU; ATP-dependent protease ATP-binding subunit HslU
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6412_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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11014..11898
DNA (885bp) protein (295aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6412_14
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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11898..12353
DNA (456bp) protein (152aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 14 items

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