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PLM4_65_b1_redo_sep16_scaffold_6553

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6553_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3..668
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6553_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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665..2098
DNA (1434bp) protein (478aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_65_b1_redo_sep16_scaffold_6553_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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2177..3184
DNA (1008bp) protein (336aa)
MoxR-like ATPases (EC:3.6.3.-)
ATPase associated with various cellular activities AAA_3 bin=GWD2_Deltaproteobacteria_55_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6553_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3187..4245
DNA (1059bp) protein (353aa)
von Willebrand factor type A bin=GWD2_Deltaproteobacteria_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
von Willebrand factor type A
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6553_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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4249..8598
DNA (4350bp) protein (1450aa)
von Willebrand factor type A bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
chloride channel
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6553_6
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

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9033..9227
DNA (195bp) protein (65aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
PLM4_65_b1_redo_sep16_scaffold_6553_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9399..9740
DNA (342bp) protein (114aa)
DOPA 4,5-dioxygenase Tax=Mastigocladopsis repens RepID=UPI0003810606
Dopa 45-dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6553_8
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9763..10128
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NN09_9DELT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_6553_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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10252..11190
DNA (939bp) protein (313aa)
Putative oxidoreductase Tax=Smithella sp. ME-1 RepID=V4FCI6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ETW99392.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
aldo/keto reductase
PLM4_65_b1_redo_sep16_scaffold_6553_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11279..11857)
DNA (579bp) protein (193aa)
hypothetical protein
id=5223928 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_6553_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11937..12227
DNA (291bp) protein (97aa)
GTP-binding protein Era
era; GTP-binding protein (era) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 11 items

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