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PLM4_65_b1_redo_sep16_scaffold_2543

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2543_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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366..1358
DNA (993bp) protein (331aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_2543_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1508..1657
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1948..2397)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AA15_STAND
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2409..3533)
DNA (1125bp) protein (375aa)
Putative acyl-CoA transferase/carnitine dehydratase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KI52_9FIRM
putative acyl-CoA transferase/carnitine dehydratase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3538..4077)
DNA (540bp) protein (180aa)
MaoC domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4077..5294)
DNA (1218bp) protein (406aa)
CoA-transferase family III protein Tax=Rhodococcus equi ATCC 33707 RepID=E9SWT5_COREQ
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5298..6257)
DNA (960bp) protein (320aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Azospira oryzae genus=Azospira taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NMT1/THI5 like domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_2543_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6671..7705)
DNA (1035bp) protein (345aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_2543_9
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7841..9271
DNA (1431bp) protein (477aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_65_b1_redo_sep16_scaffold_2543_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9367..10173
DNA (807bp) protein (269aa)
Amidohydrolase 2 bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10384..11469
DNA (1086bp) protein (362aa)
Reactivating factor for ethanolamine ammonia lyase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_b1_redo_sep16_scaffold_2543_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11453..12442
DNA (990bp) protein (330aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_65_b1_redo_sep16_scaffold_2543_13
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12988..14334)
DNA (1347bp) protein (449aa)
RND efflux system, outer membrane lipoprotein CmeC Tax=Micavibrio aeruginosavorus EPB RepID=M4VDB9_9PROT
RND efflux system, outer membrane lipoprotein CmeC
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:AGH97233.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
PLM4_65_b1_redo_sep16_scaffold_2543_14
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14343..16283)
DNA (1941bp) protein (647aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
ABC transporter family protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KS77_MICAA
ABC transporter family protein
PLM4_65_b1_redo_sep16_scaffold_2543_15

Not on your lists

comp(16280..17494)
DNA (1215bp) protein (405aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00036AA173
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49450.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Macrolide-specific efflux protein MacA
PLM4_65_b1_redo_sep16_scaffold_2543_16
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18044..18478)
DNA (435bp) protein (145aa)
Putative membrane-associated protein Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGT1_HYPSM
membrane-associated protein
Putative membrane-associated protein {ECO:0000313|EMBL:CCB65578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM4_65_b1_redo_sep16_scaffold_2543_17
unknown

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comp(18475..18780)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2543_18
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(18788..19342)
DNA (555bp) protein (185aa)
RNA polymerase ECF-type sigma factor, putative Tax=Oleispira antarctica RB-8 RepID=R4YSD9_OLEAN
RNA polymerase sigma-70 factor, ECF family protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_65_b1_redo_sep16_scaffold_2543_19
unknown

Not on your lists

19515..19748
DNA (234bp) protein (78aa)

This feature has no annotations

Displaying 19 items

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