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PLM4_65_b1_redo_sep16_scaffold_10499

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_10499_1
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..479)
-----------------
DNA (477bp)
protein (159aa)
diguanylate cyclase Tax=Arenimonas oryziterrae RepID=UPI0003B54057
Uncharacterized protein {ECO:0000313|EMBL:KFL37359.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
GAF sensor-containing diguanylate cyclase
PLM4_65_b1_redo_sep16_scaffold_10499_2
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(501..1526)
-----------------
DNA (1026bp)
protein (342aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
4-hydroxythreonine-4-phosphate dehydrogenase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ78_THEM7
PLM4_65_b1_redo_sep16_scaffold_10499_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(1526..1936)
-----------------
DNA (411bp)
protein (137aa)
Like-Sm ribonucleoprotein core Tax=Holophaga foetida DSM 6591 RepID=H1P3D5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53256.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_10499_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1933..2667)
-----------------
DNA (735bp)
protein (245aa)
PSP1 domain protein Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLN9_VEIPT
PSP1 domain-containing protein
PSP1 domain protein {ECO:0000313|EMBL:ACZ24296.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
PLM4_65_b1_redo_sep16_scaffold_10499_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(2855..4180)
-----------------
DNA (1326bp)
protein (442aa)
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003769977
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_10499_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(4177..5136)
-----------------
DNA (960bp)
protein (320aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036D3E43
Uncharacterized protein {ECO:0000313|EMBL:KDA53259.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
recombinase
PLM4_65_b1_redo_sep16_scaffold_10499_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(5150..6010)
-----------------
DNA (861bp)
protein (287aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Sphingomonas sp. LH128 RepID=J8VNZ0_9SPHN
PLM4_65_b1_redo_sep16_scaffold_10499_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6070..6825)
-----------------
DNA (756bp)
protein (252aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sodA; superoxide dismutase SodA (EC:1.15.1.1)
Superoxide dismutase Tax=Chthoniobacter flavus Ellin428 RepID=B4DC33_9BACT
PLM4_65_b1_redo_sep16_scaffold_10499_9
unknown

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comp(6857..7537)
-----------------
DNA (681bp)
protein (227aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_10499_10
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

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comp(7629..9587)
-----------------
DNA (1959bp)
protein (653aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003692EDC
two-component system, OmpR family, sensor kinase
Tax=CG_Mariprof_02
Displaying 10 items

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