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PLM4_65_b1_redo_sep16_scaffold_1931_11

Organism: PLM4_65_b1_sep16_Acidobacteria_68_8

near complete RP 42 / 55 BSCG 44 / 51 ASCG 12 / 38 MC: 1
Location: 14131..17598

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 1204.0
  • Bit_score: 808
  • Evalue 6.40e-231
Transcription-repair-coupling factor Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 1204.0
  • Bit_score: 808
  • Evalue 4.50e-231
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 1204.0
  • Bit_score: 808
  • Evalue 1.30e-231

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Taxonomy

Candidatus Koribacter versatilis → Candidatus Koribacter → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 3468
ATGAGCCGTCCCGCGCCGTGGGGGGAACTCTCCCTGCGGATCGCCGCGAGTCCACTTTTCGCCGCTTTCTCTTCCCACCTCGCCGCCGGGCGAGGTCGCGCCACGCGTCTGTCGCCGGCGGCGGCGGCGTGGGTGTTGGACCTCTTCGCCGAGCACGACGGCAAGCCGCTGGTGGTGGTGGTGCCACACGAGTCGGACGCCTTCGCCTGGCTGGAGAGCCTGCGACTGGTCGCGGGCGAGGAGGTCGGCGGCTACTTCGCAACCCCCTCGCTCTCGCCCTATCAGGAGGCGGAAGCCTCGCTCACCGTGCGGGCGCAGGAGGTTACGGCGCTCGCGGACGCCCTCGCCGGGCGCTTGCGGGCGCTTCTCGTCACGCCGCGGGCGCTCTTCCGGCGCCTGCCGGAGGCTTCCGGCCTGAGGCCGATCCCGATTCGCCGCGGCGAAGAGATCGACCTCGGGGAACTGGCGCTCCGCCTGCAGGCGCTCGGCTATCGCCGCGTCGATCTGGTGGGCGAGGTCGGGGACTTCGCGGTGCGCGGCGGCGTCTTCGACATCTTTGCGGCGGGGGACGACGAGCCCCTGCGGCTCGACCTCTTCGGCAGCGAAATCGAGAGCTTGCGTCGTTTCGAAGTCGAGTCCCAGCGCTCGCACGATGAGCTCCGGGAGGCCGCCGTCCTCCCGCTGGCGCTCTTTCCCGAGGGCCCCGACGCCGCGCGCCAGCTCGCCGGCCTGCTGGGCAGCCTGCTTGCCGGCGCAGCTTCTGAGGAGCCCGGGCGCGAGACGCGCGACCACCTCGCCACGCTCGCCGCAGGCGGGCGGTTTCCTGGTTGGGAGAATCTCCTGCCGCTCCTCGCGTCGCGGAGCCTCTCGCTCGCGGAGCTCCTTCCCGGCGCGACCTGGGTGGCGCTCGATCCGCAAGCGCTCGTTGCCGAGACGACGCATCACGCGGCCCGCCTGGCGGAGGAGTTCGATGCGCGTCGCGAACACCAACGATTCGCGCTCGAACCGGGGCTCTTGGAGCATCCGGTCGAGGTGGTCCTGGCGCTCATCGCGGGCGCGTCGGCAACGTTGCTCCCGCTTGCGGCACCGGGTGAGGCGGTCGATTTCGGAGTCGTCTCGACCGATCTTTACCACGGTCAGCTGCCGCGGTTTCCGAACGAGGTCGCGGCGACGCGCGCGCGCGACGAGCGGCTCCTGCTGGTGGCGCCCTCCGAGCGCCATGCGGCGCTTGCTGAGCTCCTCGAGGGGCGCGAGATCCCCCTCGGGCCGGGCGGCGTGGAGATCGTCGCCGGCGAGATCGAACGCGGCTATCGGATGCCGGTCGCCGGGGTCGCGATCTATGGAGAAACGCAGCTTCTCCCCCGTCCCCTGACGCGCGGCGGCAAGCGCGCCAAGGGCGGTCGATTCGGACCGTTCCTCGCGACACTGCGGGATCTCAAGGTCGGCGATCACGTCGTTCACAGCGACCACGGTATCGGTCAGTTCGTGGCGCTGCGTGCGGTGGGCGGCCCGGGCGACGCGGCCGTGTCGGCACTGCCCGCCTCGTTGCGCCGGCTCGCCGCTCCGGCGCCTGCCGACAACGAAGTGATGGAGATCCTCTACGCCGGCGGCAAGCGCCTTCTCGTGCCGCTCTCCCGGCTCGACCTCATCCAGAAATACAGCGGGATCGAGGGTCTGGCGCCACGCCTCGATCAGCTCGGTGGCTCGTCGTGGAACAAGACGAAGTCGAAGGTCCGCAGCGGTATGCGCGACATGGCGGCGGACCTGCTCAAGCTCTATGCCGAGCGCCAGCTCGCCCGGGCTCCGATACTTTCGGGGTCGACCGATCTCGAGCGCCAGTTCGCGGCGGCGTTTCCCTACGAGGAGACGCCGGATCAGGCCGAGGCGATCACCGTCGTGCTCGAGGATCTCGCGCAATCGAAACCGATGGATCGACTACTCTGCGGCGACGTCGGTTTCGGCAAGACCGAGGTCGCGATGCGCGCCGCGTTCCGCGCCGTCGATGCCGGCTACCAGGTCGCGGTGCTGGCACCGACGACGATTCTCGCGGATCAGCATCTCGAGGTCTTCGGCCGGCGCTTCGAGGGCTTCCCGATAACCATAGAGCGCTTGTCCCGGCTGCGGGTCGGCAAGGACTTGAAGGATCTCAAGACGCGGATCGCCGGCGGCATGGTGGACATTACGCTCGGTACGCATCGCCTGCTTTCGAAGGACGTCGAGTTCCAACGCCTCGGTCTGGTCGTCGTCGACGAAGAGCAGCGCTTCGGCGTCGCGCAGAAGGAGCGGCTGAAGCAGCTCAAGAAGAACGTCCACGTGCTCGCGATGTCGGCGACGCCGCTGCCGCGGACCCTGCAGCTGTCGCTCGCCGGGGTGCGCGACATCGCGGTGATCGAAACCCCACCCAAGGACCGGATGGCGATCGAGACCGCGGTGCTGCCCTTTTCGGAAGAGCTGGTGCGGGAGGCGATCGAATACGAGCTCGAGCGCGGCGGGCAGGTGTTCTACGTTTACAACCGCGTCGAGTCGATCGAACAGATGGCGGGCGTCCTGCGCGAGCTCGTCCCGGGCCTGCGGATCACGGTCGGGCACGGCCAGCTCGACGAGCGCGAGCTCTACCGCCGGATGCACGCCTTCACGGCGCGCGAGTACGACGTGCTGCTGGCCACCACGATCATCGAGAACGGCATCGACATTCCGACTGTCAACACGATGATCGTGCACCGCGCCGACCGCTTCGGATTGGCGCAGCTCTACCAGCTGCGCGGGCGGGTCGGCCGGAGCCGAGAGCTCGGCTACTGCTATCTGCTCGTGCCGCCCGATGCCCCGCTCACTGAGGAAGCGCGCCGCCGCCTCGAGGCGCTACGGGAGTTCACCGAGCTCGGGGCGGGCTTCCGCATCGCCGGTCGCGATCTCGAGATCCGCGGCGCCGGAAACCTCCTCGGCGGTGAGCAGAGCGGCCACATCGCCGAGCTCGGCATCGAGGCCTACCTCAAGATGCTGGAAGAGACGGTGCGCGAGCTCAAGGGCGAAGTGGTCGAAGAGGGTCCCGGCGTGGCGCTCGATCTGCCGCTCGCGATGACGATTCCAAGGACCTATATCGCCGACGAGAATCTGCGCATGGAGATCTATCGCAAGCTCGCGACCGCTGAGCTGCCGCGCGCGGAGCTGCTCGAGGAGCTGACCGATCGCTTCGGCCGTCCGCCGAACACGGTACTCTCGCTCCTCGATCTCGTCGATCTCAAACGCGCCGCCGAGGCACTGCGGGTGCAGGCGATCTCGGCGACCGGAGGGCAGCTGGTCTTTCGTCTGCGCCGCGACGCACGGATCGACGTCGACCGGTTGATCCGCTACGTTTCGACGCGCACCGGGGCGACCTTCAGCCCGACCGGCGTCCTCACCCTCGAACTGCCAGCCGGGCAGTCGGTCGTCGACGCAGCGCGCGCGGTGCTGGCGGAGCTCGCGGCGTGA
PROTEIN sequence
Length: 1156
MSRPAPWGELSLRIAASPLFAAFSSHLAAGRGRATRLSPAAAAWVLDLFAEHDGKPLVVVVPHESDAFAWLESLRLVAGEEVGGYFATPSLSPYQEAEASLTVRAQEVTALADALAGRLRALLVTPRALFRRLPEASGLRPIPIRRGEEIDLGELALRLQALGYRRVDLVGEVGDFAVRGGVFDIFAAGDDEPLRLDLFGSEIESLRRFEVESQRSHDELREAAVLPLALFPEGPDAARQLAGLLGSLLAGAASEEPGRETRDHLATLAAGGRFPGWENLLPLLASRSLSLAELLPGATWVALDPQALVAETTHHAARLAEEFDARREHQRFALEPGLLEHPVEVVLALIAGASATLLPLAAPGEAVDFGVVSTDLYHGQLPRFPNEVAATRARDERLLLVAPSERHAALAELLEGREIPLGPGGVEIVAGEIERGYRMPVAGVAIYGETQLLPRPLTRGGKRAKGGRFGPFLATLRDLKVGDHVVHSDHGIGQFVALRAVGGPGDAAVSALPASLRRLAAPAPADNEVMEILYAGGKRLLVPLSRLDLIQKYSGIEGLAPRLDQLGGSSWNKTKSKVRSGMRDMAADLLKLYAERQLARAPILSGSTDLERQFAAAFPYEETPDQAEAITVVLEDLAQSKPMDRLLCGDVGFGKTEVAMRAAFRAVDAGYQVAVLAPTTILADQHLEVFGRRFEGFPITIERLSRLRVGKDLKDLKTRIAGGMVDITLGTHRLLSKDVEFQRLGLVVVDEEQRFGVAQKERLKQLKKNVHVLAMSATPLPRTLQLSLAGVRDIAVIETPPKDRMAIETAVLPFSEELVREAIEYELERGGQVFYVYNRVESIEQMAGVLRELVPGLRITVGHGQLDERELYRRMHAFTAREYDVLLATTIIENGIDIPTVNTMIVHRADRFGLAQLYQLRGRVGRSRELGYCYLLVPPDAPLTEEARRRLEALREFTELGAGFRIAGRDLEIRGAGNLLGGEQSGHIAELGIEAYLKMLEETVRELKGEVVEEGPGVALDLPLAMTIPRTYIADENLRMEIYRKLATAELPRAELLEELTDRFGRPPNTVLSLLDLVDLKRAAEALRVQAISATGGQLVFRLRRDARIDVDRLIRYVSTRTGATFSPTGVLTLELPAGQSVVDAARAVLAELAA*