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PLM4_65_b1_redo_sep16_scaffold_1931

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1931_1
unknown

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3..359
-----------------
DNA (357bp)
protein (119aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00035E8E52
PLM4_65_b1_redo_sep16_scaffold_1931_2
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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366..1082
-----------------
DNA (717bp)
protein (239aa)
Methyltransferase type 11 Tax=Burkholderia sp. H160 RepID=B5WNM3_9BURK
Methyltransferase type 11 {ECO:0000313|EMBL:EEA00025.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
conserved hypothethical protein, S-adenosyl-L-methionine (SAM)-dependent methyltransferase domain
PLM4_65_b1_redo_sep16_scaffold_1931_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1079..2776
-----------------
DNA (1698bp)
protein (566aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D568_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18273.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM4_65_b1_redo_sep16_scaffold_1931_4
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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comp(2840..3823)
-----------------
DNA (984bp)
protein (328aa)
hypothetical protein Tax=Ruegeria conchae RepID=UPI000237A335
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
PLM4_65_b1_redo_sep16_scaffold_1931_5
bacterium UASB270, Bacteria

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comp(3820..6381)
-----------------
DNA (2562bp)
protein (854aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B33E32
Spermine/spermidine synthase family protein {ECO:0000313|EMBL:GAK58639.1}; species="Bacteria.;" source="bacterium UASB270.;"
spermine synthase
PLM4_65_b1_redo_sep16_scaffold_1931_6
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6371..7201)
-----------------
DNA (831bp)
protein (277aa)
4-hydroxybenzoate polyprenyltransferase bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
UbiA prenyltransferase
Tax=CG_Delta_01
PLM4_65_b1_redo_sep16_scaffold_1931_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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7242..9560
-----------------
DNA (2319bp)
protein (773aa)
Bacterial membrane protein YfhO bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Bacterial membrane protein YfhO
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1931_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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9557..12040
-----------------
DNA (2484bp)
protein (828aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X59_SOLUE
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_1931_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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12041..13567
-----------------
DNA (1527bp)
protein (509aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase, biotin carboxylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_1931_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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13570..14073
-----------------
DNA (504bp)
protein (168aa)
Acetyl-CoA carboxylase biotin carboxylase subunit, putative bin=GWF2_Methylomirabilis_70_14 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_1931_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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14131..17598
-----------------
DNA (3468bp)
protein (1156aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Transcription-repair-coupling factor Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
PLM4_65_b1_redo_sep16_scaffold_1931_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17595..18455
-----------------
DNA (861bp)
protein (287aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
Putative foldase protein PrsA Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RXV7_9DELT
prsA; putative foldase protein PrsA
PLM4_65_b1_redo_sep16_scaffold_1931_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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18442..19620
-----------------
DNA (1179bp)
protein (393aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=uncultured bacterium 293 RepID=E3T605_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
PLM4_65_b1_redo_sep16_scaffold_1931_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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19813..20253
-----------------
DNA (441bp)
protein (147aa)
Protein MraZ Tax=Holophaga foetida DSM 6591 RepID=H1NZ40_9BACT
MraZ protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1931_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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20295..21206
-----------------
DNA (912bp)
protein (304aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribosomal RNA small subunit methyltransferase H Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8M4_AZOL4
mraW; S-adenosyl-dependent methyltransferase
PLM4_65_b1_redo_sep16_scaffold_1931_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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21211..21555
-----------------
DNA (345bp)
protein (115aa)
cell division protein FtsL Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B48234
cell division protein FtsL
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_1931_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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21552..22748
-----------------
DNA (1197bp)
protein (399aa)
Peptidoglycan synthetase FtsI Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG4_KORVE
peptidoglycan glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 17 items

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