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PLM4_65_b1_redo_sep16_scaffold_27797

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_27797_1
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(1..381)
DNA (381bp) protein (127aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00035C3FDD
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
PLM4_65_b1_redo_sep16_scaffold_27797_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(442..1065)
DNA (624bp) protein (208aa)
DGPF domain-containing protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MV09_CORCM
DGPF domain-containing protein
DGPF domain-containing protein {ECO:0000313|EMBL:AFE03295.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_65_b1_redo_sep16_scaffold_27797_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1062..1607)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor Tax=Fulvivirga imtechensis AK7 RepID=L8JPU4_9BACT bin=16ft_combo_ws3_JS1 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RNA polymerase sigma factor
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_65_b1_redo_sep16_scaffold_27797_4
unknown

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1951..2199
DNA (249bp) protein (83aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_27797_5

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2253..3428
DNA (1176bp) protein (392aa)
translocation protein TolB Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
Marine sediment metagenome DNA, contig: S01H4_S01127 {ECO:0000313|EMBL:GAG79429.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
periplasmic component of the Tol biopolymer transport system
PLM4_65_b1_redo_sep16_scaffold_27797_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3341..4909)
DNA (1569bp) protein (523aa)
Putative DSBA oxidoreductase Tax=planctomycete KSU-1 RepID=I3IQ17_9PLAN
Putative DSBA oxidoreductase {ECO:0000313|EMBL:GAB63812.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
DSBA oxidoreductase
PLM4_65_b1_redo_sep16_scaffold_27797_7
unknown

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5521..5643
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 7 items

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