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PLM4_65_b1_redo_sep16_scaffold_3013

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3013_1

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1..405
DNA (405bp) protein (135aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; species="Bacteria; environmental samples.;" source="uncultured bacterium 164.;"
succinyl-CoA ligase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=uncultured bacterium 164 RepID=E3T700_9BACT
PLM4_65_b1_redo_sep16_scaffold_3013_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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553..969
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase Tax=uncultured bacterium 164 RepID=E3T6Z8_9BACT
PLM4_65_b1_redo_sep16_scaffold_3013_3

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1222..1761
DNA (540bp) protein (180aa)
Putative uncharacterized protein Tax=uncultured bacterium 164 RepID=E3T6Z7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36091.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 164.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3013_4
unknown

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1882..2769
DNA (888bp) protein (296aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3013_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2936..3457
DNA (522bp) protein (174aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I Tax=uncultured bacterium 164 RepID=E3T6Z6_9BACT
PLM4_65_b1_redo_sep16_scaffold_3013_6
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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3668..5524
DNA (1857bp) protein (619aa)
Adenylate/guanylate cyclase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFE8_ROSCS
guanylate cyclase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_b1_redo_sep16_scaffold_3013_7
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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5700..6344
DNA (645bp) protein (215aa)
ABC transporter-like protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM4_65_b1_redo_sep16_scaffold_3013_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6406..7359
DNA (954bp) protein (318aa)
Cyclic nucleotide-binding protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D080_9BACT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EDY20394.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyclic nucleotide-binding protein
PLM4_65_b1_redo_sep16_scaffold_3013_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7434..8126
DNA (693bp) protein (231aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDM66757.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative Beta-phosphoglucomutase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
HAD-superfamily hydrolase
PLM4_65_b1_redo_sep16_scaffold_3013_10
R_Gammaproteobacteria_45_9, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8195..9559)
DNA (1365bp) protein (455aa)
Transposase, IS116/IS110/IS902 Tax=Legionella pneumophila subsp. pneumophila RepID=I7I3R6_LEGPN
transposase
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_9_curated
PLM4_65_b1_redo_sep16_scaffold_3013_11
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

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10034..11530
DNA (1497bp) protein (499aa)
Putative uncharacterized protein bin=CD_OP8_4m species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
PLM4_65_b1_redo_sep16_scaffold_3013_12
Arthrospira maxima, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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11677..11820
DNA (144bp) protein (48aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI000347E61D
Uncharacterized protein {ECO:0000313|EMBL:EDZ94065.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira maxima CS-328.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3013_13
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

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11826..12062
DNA (237bp) protein (79aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003465240
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
PLM4_65_b1_redo_sep16_scaffold_3013_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(12441..13346)
DNA (906bp) protein (302aa)
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3013_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(13599..14171)
DNA (573bp) protein (191aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDI7_CHLTF
Double zinc ribbon {ECO:0000313|EMBL:CDM66219.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3013_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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14399..16615
DNA (2217bp) protein (739aa)
putative aminopeptidase (EC:3.4.17.21)
Putative aminopeptidase {ECO:0000313|EMBL:AEP12035.1}; EC=3.4.17.21 {ECO:0000313|EMBL:AEP12035.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Putative aminopeptidase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEQ2_CHLTF
PLM4_65_b1_redo_sep16_scaffold_3013_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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16819..18195
DNA (1377bp) protein (459aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64527.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Displaying 17 items

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