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PLM4_65_b1_redo_sep16_scaffold_18459

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18459_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09AX6_STIAD
PLM4_65_b1_redo_sep16_scaffold_18459_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(427..1296)
DNA (870bp) protein (290aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Purine nucleoside phosphorylase Tax=Tetrahymena thermophila (strain SB210) RepID=Q23VX8_TETTS
purine nucleoside phosphorylase
PLM4_65_b1_redo_sep16_scaffold_18459_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(1518..2408)
DNA (891bp) protein (297aa)
Nucleoside ABC transporter membrane protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGW0_CHLTF
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:AEP11460.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_18459_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(2428..3546)
DNA (1119bp) protein (373aa)
ABC-type uncharacterized transport system, permease component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD1_CHLTF
ABC transporter permease
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:AEP12194.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_18459_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3746..5254)
DNA (1509bp) protein (503aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEP12453.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEP12453.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Nucleoside ABC transporter ATP-binding protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDJ3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_18459_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(5484..6554)
DNA (1071bp) protein (357aa)
Nucleoside-binding protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFW9_CHLTF
nucleoside-binding protein
Nucleoside-binding protein {ECO:0000313|EMBL:AEP12082.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_65_b1_redo_sep16_scaffold_18459_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(6551..7030)
DNA (480bp) protein (160aa)
pyrimidine-nucleoside phosphorylase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
pyrimidine-nucleoside phosphorylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_65_b1_redo_sep16_scaffold_18459_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7056..7877)
DNA (822bp) protein (274aa)
Thymidine phosphorylase {ECO:0000313|EMBL:CDM65503.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDM65503.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase bin=GWF2_Nitrospirae_44_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PLM4_65_b1_redo_sep16_scaffold_18459_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(7992..8465)
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366AE79
PLM4_65_b1_redo_sep16_scaffold_18459_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8564..9247)
DNA (684bp) protein (228aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00035C5F8A
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
PLM4_65_b1_redo_sep16_scaffold_18459_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9396..10556)
DNA (1161bp) protein (387aa)
PilT protein-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVA6_KORVE
Integral membrane protein (PIN domain superfamily) {ECO:0000313|EMBL:CDM65447.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
twitching motility protein PilT
Displaying 11 items

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