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PLM4_65_b1_redo_sep16_scaffold_19648

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_19648_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..1532)
DNA (1530bp) protein (510aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phenylalanyl-tRNA synthetase subunit beta, non-spirochete bacterial (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG36_CHLTF
PLM4_65_b1_redo_sep16_scaffold_19648_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1695..2825)
DNA (1131bp) protein (377aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI60_CHLTF
PLM4_65_b1_redo_sep16_scaffold_19648_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2868..3248)
DNA (381bp) protein (127aa)
50S ribosomal protein L20 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL20_ACIC5
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplT; 50S ribosomal protein L20
PLM4_65_b1_redo_sep16_scaffold_19648_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3371..3574)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE01_CHLTF
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L35
PLM4_65_b1_redo_sep16_scaffold_19648_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3619..4182)
DNA (564bp) protein (188aa)
Translation initiation factor IF-3 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IF3_ANADF
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
infC; translation initiation factor IF-3
PLM4_65_b1_redo_sep16_scaffold_19648_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4399..6372)
DNA (1974bp) protein (658aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE03_CHLTF
PLM4_65_b1_redo_sep16_scaffold_19648_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6754..8985)
DNA (2232bp) protein (744aa)
Peptidyl-dipeptidase Dcp Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C929_MYXFH
Peptidase M3 {ECO:0000313|EMBL:KFA94016.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
peptidyl-dipeptidase Dcp
PLM4_65_b1_redo_sep16_scaffold_19648_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9777..10688)
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB33_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:GAO38182.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_19648_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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11047..11616
DNA (570bp) protein (190aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S3_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ82203.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_19648_10
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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11729..12646
DNA (918bp) protein (306aa)
ppkA; serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase {ECO:0000313|EMBL:AGY59641.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AGY59641.1};; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Serine/threonine protein kinase Tax=Gloeobacter kilaueensis JS1 RepID=U5QL28_9CYAN
Displaying 10 items

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