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PLM4_65_b1_redo_sep16_scaffold_999

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_999_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..311)
DNA (309bp) protein (103aa)
Glycosyl hydrolase BNR repeat-containing protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMD9_RUNSL
glycosyl hydrolase family protein
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEI50577.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
PLM4_65_b1_redo_sep16_scaffold_999_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

807..6473
DNA (5667bp) protein (1889aa)
serine/threonine protein kinase bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_999_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6693..7616
DNA (924bp) protein (308aa)
Phosphoesterase, PA-phosphatase related Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025P4_SOLUE
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:ABJ83275.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_999_4
unknown

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7588..7731
DNA (144bp) protein (48aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_999_5
unknown

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comp(7979..8656)
DNA (678bp) protein (226aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_999_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8725..10038)
DNA (1314bp) protein (438aa)
Amino acid transporter Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P8W1_CYAGP
amino acid permease-associated region
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_b1_redo_sep16_scaffold_999_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10258..11607)
DNA (1350bp) protein (450aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E6B1C
(2Fe-2S)-binding protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AIF49002.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
PLM4_65_b1_redo_sep16_scaffold_999_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(11604..12806)
DNA (1203bp) protein (401aa)
Glycine cleavage T protein (Aminomethyl transferase) Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS79_KORVE
glycine cleavage T protein (aminomethyl transferase)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_999_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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12892..14472
DNA (1581bp) protein (527aa)
FAD dependent oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS78_KORVE
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_999_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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14668..16272
DNA (1605bp) protein (535aa)
Amine oxidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS77_KORVE
amine oxidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_999_11
unknown

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16288..16416
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_999_12
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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16458..17498
DNA (1041bp) protein (347aa)
Aromatic amino acid beta-eliminating lyase/threonine aldolase Tax=Thermincola potens (strain JR) RepID=D5XAQ1_THEPJ
aromatic amino acid beta-eliminating lyase/threonine aldolase
Aromatic amino acid beta-eliminating lyase/threonine aldolase {ECO:0000313|EMBL:ADG83255.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM4_65_b1_redo_sep16_scaffold_999_13
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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comp(17648..17950)
DNA (303bp) protein (101aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM4_65_b1_redo_sep16_scaffold_999_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18581..20689
DNA (2109bp) protein (703aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cbbT; transketolase (TK) (EC:2.2.1.1)
transketolase Tax=Bordetella sp. FB-8 RepID=UPI000376FAF9
PLM4_65_b1_redo_sep16_scaffold_999_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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20693..21139
DNA (447bp) protein (149aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDM65716.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CDM65716.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribose 5-phosphate isomerase Tax=Schlesneria paludicola RepID=UPI00029A432B
ribose-5-phosphate isomerase B
PLM4_65_b1_redo_sep16_scaffold_999_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(21279..22277)
DNA (999bp) protein (333aa)
Putative uncharacterized protein Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDM65905.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipid kinase
PLM4_65_b1_redo_sep16_scaffold_999_17
unknown

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22313..22423
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_999_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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22420..23412
DNA (993bp) protein (331aa)
NAD(P)H quinone oxidoreductase, PIG3 family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF48_9CHLR
Putative NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:CDM66363.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NAD(P)H quinone oxidoreductase, PIG3 family
PLM4_65_b1_redo_sep16_scaffold_999_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(23483..25189)
DNA (1707bp) protein (569aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM66645.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM66645.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH65_CHLTF
PLM4_65_b1_redo_sep16_scaffold_999_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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25929..27311
DNA (1383bp) protein (461aa)
Putative Peptidase M20 Tax=Candidatus Nitrospira defluvii RepID=D8P8T6_9BACT
putative peptidase M20
Putative Peptidase M20 {ECO:0000313|EMBL:CBK43918.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_999_21
unknown

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comp(27369..28217)
DNA (849bp) protein (283aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_999_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(28514..28906)
DNA (393bp) protein (131aa)
PilZ domain-containing protein {ECO:0000313|EMBL:CDM66922.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_999_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(28958..29803)
DNA (846bp) protein (282aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM66923.1}; EC=1.1.1.157 {ECO:0000313|EMBL:CDM66923.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JMH8_9EURY
PLM4_65_b1_redo_sep16_scaffold_999_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

30035..31012
DNA (978bp) protein (326aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Thioredoxin reductase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thioredoxin reductase
Displaying 24 items

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