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PLM4_65_b1_redo_sep16_scaffold_8063

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_8063_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..674)
DNA (672bp) protein (224aa)
ABC-2 type transport system permease protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT2_9BACT
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CDM66907.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8063_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(799..2040)
DNA (1242bp) protein (414aa)
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CDM66906.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8063_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2153..3367)
DNA (1215bp) protein (405aa)
Efflux ABC transporter, macrolide exporter (MacB) family, permease protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8U8_ACIC5
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CDM66905.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
macrolide ABC transporter permease
PLM4_65_b1_redo_sep16_scaffold_8063_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3552..4316)
DNA (765bp) protein (255aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC-type antimicrobial peptide transport system, ATPase component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA7_CHLTF
antimicrobial peptide ABC transporter ATPase
PLM4_65_b1_redo_sep16_scaffold_8063_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4316..5833)
DNA (1518bp) protein (506aa)
RND family efflux transporter, MFP subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA8_CHLTF
Multidrug resistance efflux pump {ECO:0000313|EMBL:CDM66903.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RND family efflux transporter MFP subunit
PLM4_65_b1_redo_sep16_scaffold_8063_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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6226..6813
DNA (588bp) protein (196aa)
FHA domain containing protein Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJG6_9BACT
FHA domain containing protein {ECO:0000313|EMBL:ABV27251.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_8063_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6966..8570
DNA (1605bp) protein (535aa)
Protein kinase family protein,FHA domain-containing protein {ECO:0000313|EMBL:CDM66901.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CDM66901.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Serine/threonine protein kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDS5_CHLTF
serine/threonine protein kinase
PLM4_65_b1_redo_sep16_scaffold_8063_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8579..9115
DNA (537bp) protein (179aa)
Predicted membrane protein/domain {ECO:0000313|EMBL:CDM66900.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
kgd; alpha-ketoglutarate decarboxylase
Zinc finger/thioredoxin putative bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
PLM4_65_b1_redo_sep16_scaffold_8063_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9163..10908
DNA (1746bp) protein (582aa)
Serine phosphatase RsbU, regulator of sigma subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDS6_CHLTF
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:CDM66898.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
serine phosphatase RsbU
Displaying 9 items

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