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PLM4_65_b1_redo_sep16_scaffold_9151

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9151_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2..1888
DNA (1887bp) protein (629aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU9_CHLTF
PLM4_65_b1_redo_sep16_scaffold_9151_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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2019..2330
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPK1_MURRD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_65_b1_redo_sep16_scaffold_9151_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2364..3083)
DNA (720bp) protein (240aa)
methyltransferase (EC:2.1.1.-)
Probable methyltransferase {ECO:0000313|EMBL:CAN95018.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAN95018.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Probable methyltransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFR0_SORC5
PLM4_65_b1_redo_sep16_scaffold_9151_4
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3534..4478
DNA (945bp) protein (315aa)
DNA ligase D bin=GWA2_OP3_52_12 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ATP-dependent DNA ligase
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM4_65_b1_redo_sep16_scaffold_9151_5
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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4634..5464
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYV0_METPS
Uncharacterized protein {ECO:0000313|EMBL:KHE91641.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
TPR repeat-containing protein
PLM4_65_b1_redo_sep16_scaffold_9151_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5788..9099
DNA (3312bp) protein (1104aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILN1_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42219.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_9151_7
unknown

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9225..9395
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_9151_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10008..10298
DNA (291bp) protein (97aa)
30S ribosomal protein S12 Tax=Koribacter versatilis (strain Ellin345) RepID=RS12_KORVE
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsL; 30S ribosomal protein S12
Displaying 8 items

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