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PLM4_65_b1_redo_sep16_scaffold_4727

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4727_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QGS5_SPILD
PLM4_65_b1_redo_sep16_scaffold_4727_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1142..1555
DNA (414bp) protein (138aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z123_DESAF
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_4727_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1840..2634)
DNA (795bp) protein (265aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Pyridoxine 5'-phosphate synthase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=PDXJ_SYNJB
pdxJ; pyridoxine 5'-phosphate synthase
PLM4_65_b1_redo_sep16_scaffold_4727_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2690..3529)
DNA (840bp) protein (280aa)
Glycosyltransferases involved in cell wall biogenesis Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDM1_CHLTF
Glycosyl transferase {ECO:0000313|EMBL:CDM66917.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cell wall biosynthesis glycosyltransferase
PLM4_65_b1_redo_sep16_scaffold_4727_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4191..5912
DNA (1722bp) protein (574aa)
C-terminal processing peptidase {ECO:0000313|EMBL:CDM66918.1}; EC=3.4.21.102 {ECO:0000313|EMBL:CDM66918.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH65_CHLTF
PLM4_65_b1_redo_sep16_scaffold_4727_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6116..7279)
DNA (1164bp) protein (388aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:CDM66869.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDM66869.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YF11_9DELT
S-adenosylmethionine-dependent methyltransferase
PLM4_65_b1_redo_sep16_scaffold_4727_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7492..9102
DNA (1611bp) protein (537aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:CDM66912.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CDM66912.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE98_CHLTF
PLM4_65_b1_redo_sep16_scaffold_4727_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9242..10279
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DNP1_HALPG
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDM66911.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
oligopeptide/dipeptide ABC transporter ATPase
PLM4_65_b1_redo_sep16_scaffold_4727_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10393..11388
DNA (996bp) protein (332aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDM66910.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein bin=bin7_NC10_sister species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
appF; oligopeptide transport ATP-binding protein AppF
PLM4_65_b1_redo_sep16_scaffold_4727_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11587..12588
DNA (1002bp) protein (334aa)
Yip1 domain {ECO:0000313|EMBL:CDM66909.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_4727_11
unknown

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comp(12670..13116)
DNA (447bp) protein (149aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4727_12
unknown

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comp(13109..13591)
DNA (483bp) protein (161aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4727_13
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13602..14060)
DNA (459bp) protein (153aa)
Putative uncharacterized protein bin=GWF1_Spirochaetes_51_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Putative uncharacterized protein {ECO:0000313|EMBL:CBX30594.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_4727_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(14091..14465)
DNA (375bp) protein (125aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT1_9BACT
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CDM66908.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
Displaying 14 items

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