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PLM4_65_b1_redo_sep16_scaffold_6542

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_6542_1

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2..523
DNA (522bp) protein (174aa)
Crp Tax=uncultured organism RepID=K9LK17_9ZZZZ
Crp {ECO:0000313|EMBL:AFK83709.1}; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6542_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(804..1637)
DNA (834bp) protein (278aa)
Uncharacterized protein conserved in bacteria Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGD1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66339.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_6542_3
unknown

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comp(1637..1786)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_6542_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1810..2604)
DNA (795bp) protein (265aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIH1_CHLTF
PLM4_65_b1_redo_sep16_scaffold_6542_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2702..3154)
DNA (453bp) protein (151aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LII3_CHLTF
PLM4_65_b1_redo_sep16_scaffold_6542_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3235..3861)
DNA (627bp) protein (209aa)
Outer membrane protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ36_CHLTF
Outer membrane protein {ECO:0000313|EMBL:CDM66342.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane protein
PLM4_65_b1_redo_sep16_scaffold_6542_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3949..7077)
DNA (3129bp) protein (1043aa)
Surface antigen Tax=uncultured Acidobacteria bacterium RepID=H5SDC4_9BACT
Beta-barrel assembly machine subunit BamA {ECO:0000313|EMBL:CDM66343.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
outer membrane protein assembly complex, YaeT protein
PLM4_65_b1_redo_sep16_scaffold_6542_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7415..9793)
DNA (2379bp) protein (793aa)
ATPase Tax=uncultured Acidobacteria bacterium RepID=H5SDC3_9BACT
ATPase with chaperone activity, ATP-binding subunit {ECO:0000313|EMBL:CDM66344.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC
PLM4_65_b1_redo_sep16_scaffold_6542_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9990..10307)
DNA (318bp) protein (106aa)
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDM66345.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM66345.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Lipoprotein releasing system ATP-binding protein Tax=Gluconobacter thailandicus RepID=M9M3M2_GLUTH
lipoprotein releasing system ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_6542_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10506..10757)
DNA (252bp) protein (84aa)
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CDM66345.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM66345.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter Tax=Alistipes senegalensis RepID=UPI0002FF051A
ABC-type transport, ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_6542_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10846..12081)
DNA (1236bp) protein (412aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPR1_SYNFM
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CDM66346.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
LolC/E family lipoprotein releasing system, transmembrane protein
Displaying 11 items

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