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PLM4_65_b1_redo_sep16_scaffold_2219

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2219_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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440..3223
DNA (2784bp) protein (928aa)
Ribonuclease G and E {ECO:0000313|EMBL:CDM66092.1}; EC=3.1.26.- {ECO:0000313|EMBL:CDM66092.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribonuclease, Rne/Rng family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YX3_SOLUE
ribonuclease
PLM4_65_b1_redo_sep16_scaffold_2219_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3374..4345
DNA (972bp) protein (324aa)
Alpha/beta hydrolase fold protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TNN1_9CHLR
Predicted hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:CDM66091.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alpha/beta hydrolase fold protein domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2219_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4497..5138)
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NI3_SOLUE
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABJ88787.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_2219_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5198..6343)
DNA (1146bp) protein (382aa)
Cyclic dehypoxanthine futalosine synthase {ECO:0000256|HAMAP-Rule:MF_00992}; Short=Cyclic DHFL synthase {ECO:0000256|HAMAP-Rule:MF_00992};; EC=1.21.98.1 {ECO:0000256|HAMAP-Rule:MF_00992};; Dehypoxanthine futalosine cyclase {ECO:0000256|HAMAP-Rule:MF_00992}; Menaquinone biosynthetic enzyme MqnC {ECO:0000256|HAMAP-Rule:MF_00992}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Radical SAM domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020Q8_SOLUE
radical SAM domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2219_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6413..7129)
DNA (717bp) protein (239aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative periplasmic solute-binding protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN3_CHLTF
putative periplasmic solute-binding protein
PLM4_65_b1_redo_sep16_scaffold_2219_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7434..8078
DNA (645bp) protein (215aa)
Kynurenine formamidase {ECO:0000313|EMBL:CDM64258.1}; EC=3.5.1.9 {ECO:0000313|EMBL:CDM64258.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative metal-dependent hydrolase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFG6_CHLTF
putative metal-dependent hydrolase
PLM4_65_b1_redo_sep16_scaffold_2219_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8106..8480
DNA (375bp) protein (125aa)
hypothetical protein Tax=Deinococcus wulumuqiensis RepID=UPI00034C9D24
Predicted methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:CDM64257.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methylated-DNA--[protein]-cysteine S-methyltransferase
PLM4_65_b1_redo_sep16_scaffold_2219_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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8504..8917
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS67_KORVE
hypothetical protein
UPF0145 protein Acid345_1281 {ECO:0000256|HAMAP-Rule:MF_00338}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_2219_9
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8914..9333
DNA (420bp) protein (140aa)
thioesterase superfamily protein; K02614 acyl-CoA thioesterase [EC:3.1.2.-] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
thioesterase superfamily protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_65_b1_redo_sep16_scaffold_2219_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9516..11096
DNA (1581bp) protein (527aa)
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDM64256.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
diguanylate cyclase bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
cph2B; HAMP domain/GAF domain/GGDEF domain-containing protein
PLM4_65_b1_redo_sep16_scaffold_2219_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11277..13019
DNA (1743bp) protein (581aa)
ABC-type multidrug transport system, ATPase and permease components Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHQ1_CHLTF
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:CDM64255.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug ABC transporter ATPase/permease
PLM4_65_b1_redo_sep16_scaffold_2219_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13053..13496
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64254.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_b1_redo_sep16_scaffold_2219_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13504..15378
DNA (1875bp) protein (625aa)
ABC-type multidrug transport system, ATPase and permease components Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLV4_CHLTF
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:CDM64253.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
multidrug ABC transporter ATPase/permease
PLM4_65_b1_redo_sep16_scaffold_2219_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15489..17243
DNA (1755bp) protein (585aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036E3866
Enterochelin esterase-like enzyme {ECO:0000313|EMBL:CDM66937.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_2219_15
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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17539..19737
DNA (2199bp) protein (733aa)
Peptidase S9 prolyl oligopeptidase Tax=Prevotella copri CAG:164 RepID=R6C3R2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53778.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
PLM4_65_b1_redo_sep16_scaffold_2219_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19978..21342
DNA (1365bp) protein (455aa)
Oligopeptide transporter, OPT superfamily Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAQ9_ANAD2
oligopeptide transporter
Oligopeptide transporter, OPT superfamily {ECO:0000313|EMBL:ACL67558.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
Displaying 16 items

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