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PLM4_65_b1_redo_sep16_scaffold_3307

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3307_1
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..759)
DNA (759bp) protein (253aa)
Glutaconyl-CoA decarboxylase subunit beta Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L5F6_9BACT
sodium ion-translocating decarboxylase subunit beta
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_3307_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(764..2335)
DNA (1572bp) protein (524aa)
Biotin attachment protein Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4IJP2_9DELT
Putative carboxylase {ECO:0000313|EMBL:CDH43101.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
pyruvate carboxylase, beta chain
PLM4_65_b1_redo_sep16_scaffold_3307_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2332..2577)
DNA (246bp) protein (82aa)
glyceraldehyde-3-phosphate dehydrogenase 2 (EC:1.2.1.59)
Oxaloacetate decarboxylase, alpha subunit Tax=Campylobacter upsaliensis JV21 RepID=E6L8M8_CAMUP
Putative carboxylase {ECO:0000313|EMBL:CDH43101.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
PLM4_65_b1_redo_sep16_scaffold_3307_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2997..3860
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9QAJ5_9NOSO
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3307_5
Cyanobium gracile, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3857..4834
DNA (978bp) protein (326aa)
Uncharacterized protein Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9PAH0_CYAGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY29589.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium gracile (strain ATCC 27147 / PCC 6307).;"
PLM4_65_b1_redo_sep16_scaffold_3307_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4831..5331
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9QC38_9NOSO
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_3307_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5341..6303)
DNA (963bp) protein (321aa)
biotin-(acetyl-CoA carboxylase) ligase (EC:6.3.4.15)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B64D48
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_3307_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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6518..7177
DNA (660bp) protein (220aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003612996
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_65_b1_redo_sep16_scaffold_3307_9
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

7194..8231
DNA (1038bp) protein (346aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Galactose-1-phosphate uridylyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Q0_CALAS
galT; galactose-1-phosphate uridylyltransferase
PLM4_65_b1_redo_sep16_scaffold_3307_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8228..9400
DNA (1173bp) protein (391aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Galactokinase Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU89_TRURR
Galactokinase
PLM4_65_b1_redo_sep16_scaffold_3307_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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9472..10032
DNA (561bp) protein (187aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_3307_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10109..11743)
DNA (1635bp) protein (545aa)
Putative sodium/hydrogen transporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A773_GEMAT
putative sodium/hydrogen transporter
Putative sodium/hydrogen transporter {ECO:0000313|EMBL:BAH38083.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_65_b1_redo_sep16_scaffold_3307_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11864..13246
DNA (1383bp) protein (461aa)
FAD binding domain in molybdopterin dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_65_b1_redo_sep16_scaffold_3307_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

13243..15339
DNA (2097bp) protein (699aa)
Xanthine dehydrogenase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HYL7_CALAS
xdh; xanthine dehydrogenase
Xanthine dehydrogenase {ECO:0000313|EMBL:BAL98104.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_65_b1_redo_sep16_scaffold_3307_15
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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15374..17479
DNA (2106bp) protein (702aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Aminicenantes_62_12_curated
PLM4_65_b1_redo_sep16_scaffold_3307_16
unknown

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17518..17895
DNA (378bp) protein (126aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3307_17
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17920..18885)
DNA (966bp) protein (322aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD89_RHOM4
Threonine dehydratase, catabolic {ECO:0000313|EMBL:EYF08461.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
PLM4_65_b1_redo_sep16_scaffold_3307_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19007..19786
DNA (780bp) protein (260aa)
peptidase S58 DmpA
Peptidase S58 DmpA bin=GWA2_Ignavibacteria_55_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 18 items

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