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PLM4_65_b1_redo_sep16_scaffold_18565

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_18565_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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2..1231
DNA (1230bp) protein (410aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
lipopolysaccharide biosynthesis protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
PLM4_65_b1_redo_sep16_scaffold_18565_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1228..1977
DNA (750bp) protein (250aa)
Protein tyrosine kinase, putative Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74BQ8_GEOSL
protein tyrosine kinase
Protein tyrosine kinase, putative {ECO:0000313|EMBL:AAR35359.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM4_65_b1_redo_sep16_scaffold_18565_3
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

1985..3355
DNA (1371bp) protein (457aa)
sugar transferase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sugar transferase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
PLM4_65_b1_redo_sep16_scaffold_18565_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(3352..4104)
DNA (753bp) protein (251aa)
acid phosphatase bin=CNBR_ACIDO species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
5'-nucleotidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_18565_5
unknown

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4415..5065
DNA (651bp) protein (217aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_18565_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5165..8335
DNA (3171bp) protein (1057aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000362A67A
glycosyl hydrolase BNR repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_18565_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(8400..8747)
DNA (348bp) protein (116aa)
Growth inhibitor Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D493_PELTS
MazF; growth inhibitor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_b1_redo_sep16_scaffold_18565_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8748..8990)
DNA (243bp) protein (81aa)
Transcriptional regulator/antitoxin, MazE Tax=Geobacter sp. (strain M18) RepID=E8WIQ1_GEOS8
transcriptional regulator/antitoxin MazE
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_b1_redo_sep16_scaffold_18565_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9072..9545)
DNA (474bp) protein (158aa)
Response regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UBQ6_MYXSD
Response regulator {ECO:0000313|EMBL:AKF82193.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
response regulator
PLM4_65_b1_redo_sep16_scaffold_18565_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(9721..10251)
DNA (531bp) protein (177aa)
HNH endonuclease bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
HNH endonuclease
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 10 items

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