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PLM4_65_b1_redo_sep16_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_263_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2..655)
DNA (654bp) protein (218aa)
NmrA family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX0_SOLUE
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ABJ86545.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_263_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(682..1320)
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULU5_ANASK
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1331..2398)
DNA (1068bp) protein (356aa)
putative deoxyhypusine synthase (EC:2.5.1.46)
Putative Deoxyhypusine synthase Tax=Candidatus Nitrospira defluvii RepID=D8P815_9BACT
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2488..4611)
DNA (2124bp) protein (708aa)
WD40 repeat-domain-containing protein-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BAQ1_STRRD
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4619..5761)
DNA (1143bp) protein (381aa)
3'-5' exonuclease bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3'-5' exonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_263_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5874..6233
DNA (360bp) protein (120aa)
thioredoxin Tax=Salisaeta longa RepID=UPI0003B4B075
thioredoxin
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6230..6910
DNA (681bp) protein (227aa)
Putative esterase Tax=Rhodanobacter denitrificans RepID=I4WUU3_9GAMM
putative esterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_8
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6946..8112
DNA (1167bp) protein (389aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Geobacter sp. (strain M18) RepID=E8WMB8_GEOS8
PAS/PAC domain-containing heme-binding containing sensor histidine kinase
PLM4_65_b1_redo_sep16_scaffold_263_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8147..8980)
DNA (834bp) protein (278aa)
MazG family protein Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXU5_PARL1
MazG family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_10
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(8977..10713)
DNA (1737bp) protein (579aa)
hypothetical protein bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_13_Chloroflexi_50_21_curated
PLM4_65_b1_redo_sep16_scaffold_263_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10729..11235)
DNA (507bp) protein (169aa)
cell division protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B67090
Cell division inhibitor SULA {ECO:0000313|EMBL:EDL57743.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
cyclase/dehydrase
PLM4_65_b1_redo_sep16_scaffold_263_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11246..11797)
DNA (552bp) protein (184aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

11880..12848
DNA (969bp) protein (323aa)
qor2; NADPH:quinone reductase (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
qor2; NADPH:quinone reductase (EC:1.6.5.5)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12876..13421
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBE3_THENN
bifunctional recombination factor protein RarA/hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_263_15
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13421..13819
DNA (399bp) protein (133aa)
Putative fluoride ion transporter CrcB Tax=Rhodovulum sp. PH10 RepID=J6LJV7_9RHOB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
camphor resistance protein CrcB
PLM4_65_b1_redo_sep16_scaffold_263_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13831..14175
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Sphingobium lactosutens DS20 RepID=T0HSL9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB15133.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
protein of unknown function DUF190
PLM4_65_b1_redo_sep16_scaffold_263_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(14180..15004)
DNA (825bp) protein (275aa)
PA-phosphatase-like phosphoesterase bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PA-phosphatase-like phosphoesterase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15187..16371
DNA (1185bp) protein (395aa)
Serine/threonine protein kinase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYB3_HALO1
protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_263_19
unknown

Not on your lists

comp(16394..16963)
DNA (570bp) protein (190aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_263_20
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17050..18822)
DNA (1773bp) protein (591aa)
hypothetical protein Tax=Methylococcus capsulatus RepID=UPI000379691F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92929.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM4_65_b1_redo_sep16_scaffold_263_21
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18943..19509
DNA (567bp) protein (189aa)
hypothetical protein Tax=Cupriavidus sp. BIS7 RepID=UPI00031B5482
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_263_22
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19876..20880)
DNA (1005bp) protein (335aa)
Alcohol dehydrogenase GroES domain protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5E1_ALKEH
alcohol dehydrogenase
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ABI57946.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM4_65_b1_redo_sep16_scaffold_263_23
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20898..22202)
DNA (1305bp) protein (435aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N500_ANATU
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22290..24437)
DNA (2148bp) protein (716aa)
Transporter, DAACS family Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ETX07562.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
amino acid ABC transporter substrate-binding protein
PLM4_65_b1_redo_sep16_scaffold_263_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(24434..25360)
DNA (927bp) protein (309aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375EE29
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM4_65_b1_redo_sep16_scaffold_263_26
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

25500..26870
DNA (1371bp) protein (457aa)
Putative Peptidase M20 Tax=Candidatus Nitrospira defluvii RepID=D8P8T6_9BACT
putative peptidase M20
Putative Peptidase M20 {ECO:0000313|EMBL:CBK43918.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_b1_redo_sep16_scaffold_263_27
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

26954..27304
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZV7_SOLUE
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABJ84808.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_65_b1_redo_sep16_scaffold_263_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

27301..29988
DNA (2688bp) protein (896aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378DB5F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_263_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30006..30443)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI000372687C
Rieske (2Fe-2S) domain-containing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_65_b1_redo_sep16_scaffold_263_30
unknown

Not on your lists

comp(30440..30988)
DNA (549bp) protein (183aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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