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PLM4_65_b1_redo_sep16_scaffold_399

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_399_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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2..1087
DNA (1086bp) protein (362aa)
ABC efflux pump, inner membrane subunit bin=RBG_16_Aminicenantes_66_30 tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
efflux ABC transporter inner membrane protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_65_b1_redo_sep16_scaffold_399_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1256..2467)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein Tax=Shewanella halifaxensis (strain HAW-EB4) RepID=B0TJK9_SHEHH
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2464..3168)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QT2_SYMTH
ABC transporter ATP-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_4
bacterium UASB270, Bacteria

Not on your lists

comp(3152..4714)
DNA (1563bp) protein (521aa)
RND family efflux transporter, MFP subunit Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6F0_DESSD
Uncharacterized protein {ECO:0000313|EMBL:GAK59135.1}; species="Bacteria.;" source="bacterium UASB270.;"
RND family efflux transporter, MFP subunit
PLM4_65_b1_redo_sep16_scaffold_399_5
bacterium UASB270, Bacteria

Not on your lists

comp(4711..6186)
DNA (1476bp) protein (492aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1YZ62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAK58109.1}; species="Bacteria.;" source="bacterium UASB270.;"
tolC1; outer membrane efflux protein
PLM4_65_b1_redo_sep16_scaffold_399_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6205..6522)
DNA (318bp) protein (106aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLG6_CHLTF
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6519..7076)
DNA (558bp) protein (186aa)
ATP synthase subunit b Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=ATPF_ANADF
ATP synthase F0 subunit B
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7085..7312)
DNA (228bp) protein (76aa)
ATP synthase subunit c Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFS1_RHOMR
ATP synthase subunit c
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7354..8295)
DNA (942bp) protein (314aa)
ATP synthase subunit a bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
F0F1 ATP synthase subunit A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8292..8675)
DNA (384bp) protein (128aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8690..8932)
DNA (243bp) protein (81aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8999..10120)
DNA (1122bp) protein (374aa)
hypothetical protein
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_13
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10153..10593)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWH8_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB73302.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_b1_redo_sep16_scaffold_399_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10604..11323)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D733_9BACT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11340..11969)
DNA (630bp) protein (210aa)
LemA family protein Tax=Holophaga foetida DSM 6591 RepID=H1P0P9_9BACT
LemA family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12117..13721)
DNA (1605bp) protein (535aa)
NADH dehydrogenase subunit M Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS53_KORVE
proton-translocating NADH-quinone oxidoreductase subunit M
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13741..15873)
DNA (2133bp) protein (711aa)
NADH dehydrogenase subunit L Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS54_KORVE
proton-translocating NADH-quinone oxidoreductase subunit L
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15998..16471)
DNA (474bp) protein (158aa)
Molybdenum cofactor synthesis domain protein Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WT70_ALIAD
molybdenum cofactor synthesis domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16593..17480
DNA (888bp) protein (296aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379A107
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

17509..18441
DNA (933bp) protein (311aa)
von Willebrand factor A bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18509..18793
DNA (285bp) protein (95aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364628B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC61070.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
PLM4_65_b1_redo_sep16_scaffold_399_22
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18821..19792
DNA (972bp) protein (324aa)
Putative Polysaccharide deacetylase Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J8J1_9BURK
Putative Polysaccharide deacetylase {ECO:0000313|EMBL:CCD29088.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candidatus Glomeribacter gigasporarum BEG34.;"
polysaccharide deacetylase
PLM4_65_b1_redo_sep16_scaffold_399_23
unknown

Not on your lists

comp(19777..20160)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_399_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20314..20751)
DNA (438bp) protein (146aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(20762..21604)
DNA (843bp) protein (281aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_26
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21601..22395)
DNA (795bp) protein (265aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22392..22928)
DNA (537bp) protein (179aa)
RNA polymerase sigma-E factor bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_28
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

23148..23792
DNA (645bp) protein (215aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN81_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70223.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_b1_redo_sep16_scaffold_399_29
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23906..24253)
DNA (348bp) protein (116aa)
membrane protein Tax=Methylotenera RepID=UPI00037EDCC3
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_399_30
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(24274..25023)
DNA (750bp) protein (250aa)
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying items 1-30 of 45 in total

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