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PLM4_65_b1_redo_sep16_scaffold_12656

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_12656_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3..911
DNA (909bp) protein (303aa)
Diguanylate phosphodiesterase bin=GWD2_Nitrospirae-related_57_8 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
diguanylate phosphodiesterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1023..2663
DNA (1641bp) protein (547aa)
Lipid A core-O-antigen ligase-like enzyme Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKV6_CHLTF
Lipid A core - O-antigen ligase-like enzyme
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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2704..4368
DNA (1665bp) protein (555aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J477_DESRM
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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4395..5501
DNA (1107bp) protein (369aa)
EAL domain-containing protein Tax=Thiorhodovibrio sp. 970 RepID=H8YYG2_9GAMM
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(5592..7169)
DNA (1578bp) protein (526aa)
allophanate hydrolase bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
allophanate hydrolase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(7181..7948)
DNA (768bp) protein (256aa)
UPF0271 protein Isova_0113 Tax=Isoptericola variabilis (strain 225) RepID=F6FQW1_ISOV2
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_12656_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7953..8687)
DNA (735bp) protein (245aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 7 items

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