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PLM4_65_b1_redo_sep16_scaffold_4388

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_4388_1
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3..137
DNA (135bp) protein (45aa)
sugar phosphate isomerase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B539F1
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEU35129.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
PLM4_65_b1_redo_sep16_scaffold_4388_2
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(410..2308)
DNA (1899bp) protein (633aa)
Glycoside hydrolase family 3 domain protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJX7_RHOMR
glycoside hydrolase family protein
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_b1_redo_sep16_scaffold_4388_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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2386..3432
DNA (1047bp) protein (349aa)
Putative lipoprotein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CC98_MYXFH
putative lipoprotein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3429..4055
DNA (627bp) protein (209aa)
Mutator MutT protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LU5_SYMTH
mutT; mutator MutT protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(4086..4793)
DNA (708bp) protein (236aa)
Membrane protein containing DUF165 Tax=mine drainage metagenome RepID=T1D2W2_9ZZZZ
membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_trna_2
unknown

Not on your lists

comp(4843..4914)
DNA (72bp)
transferRNA Val
PLM4_65_b1_redo_sep16_scaffold_4388_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4982..5965)
DNA (984bp) protein (328aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6057..8387)
DNA (2331bp) protein (777aa)
penicillin-binding protein 1A; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
penicillin-binding protein 1A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_8
unknown

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8619..9356
DNA (738bp) protein (246aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_4388_9
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9356..9904
DNA (549bp) protein (183aa)
OmpA/MotB domain protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X797_ACISM
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADW71331.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM4_65_b1_redo_sep16_scaffold_4388_trna_1
unknown

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comp(9914..9987)
DNA (74bp)
transferRNA Arg
PLM4_65_b1_redo_sep16_scaffold_4388_10
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9997..10974)
DNA (978bp) protein (326aa)
Integrase family protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFY4_THET1
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACZ41840.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM4_65_b1_redo_sep16_scaffold_4388_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11112..11417)
DNA (306bp) protein (102aa)
Rare lipoprotein A Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC18_9RHOB
rare lipoprotein A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11594..13069)
DNA (1476bp) protein (492aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJW4_ROSCS
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

13146..13496
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit A bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
NADH-quinone oxidoreductase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_4388_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13511..15043
DNA (1533bp) protein (511aa)
nuoF; NADH-quinone oxidoreductase subunit F (NADH dehydrogenase I, chain F) (NDH-1, chain F) (EC:1.6.5.3 1.6.99.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoF; NADH-quinone oxidoreductase chain F
Tax=CSP1_5_NC10
Displaying 16 items

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