name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_b1_redo_sep16_scaffold_1710_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(2..1150)
|
Adenylate/guanylate cyclase with GAF sensor and FHA domain Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B018_HERA2
adenylate cyclase
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(1196..2176)
|
gpsA1; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Sorangium cellulosum (strain So ce56) RepID=A9ET32_SORC5
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(2173..2781)
|
Glycerol-3-phosphate acyltransferase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=PLSY_ANADF
membrane protein
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2809..3366)
|
2'-5' RNA ligase Tax=uncultured prokaryote RepID=H5SIR3_9ZZZZ bin=RBG9 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(3363..4622)
|
CinA-like protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJA0_CHLTF
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
competence/damage-inducible protein CinA C-terminal domain-containing protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(4619..5086)
|
Phosphatidylglycerophosphatase A Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6H3_ACIC5
phosphatidylglycerophosphatase A
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria
|
Not on your lists |
comp(5108..6157)
|
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium HF0770_27F21 RepID=E0XYT4_9BACT
membrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_8
unknown
|
Not on your lists |
comp(6154..6339)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_1710_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(6400..7809)
|
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(7817..10012)
|
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(10338..10796)
|
Transcriptional repressor NrdR Tax=uncultured Acidobacteria bacterium RepID=H5SFE3_9BACT
transcriptional regulator NrdR
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(10793..11833)
|
hypothetical protein; K07027 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
12024..12602
|
RNA polymerase sigma factor Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AX4_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_14
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria
|
Not on your lists |
12613..13239
|
Putative transmembrane anti-sigma factor Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EJ96_CHLPB
transmembrane anti-sigma factor
Tax=RBG_13_Aminicenantes_63_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
13283..13834
|
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AX6_SOLUE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
13815..14018
|
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
14020..15582
|
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003828CF9
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_18
RLO_PLX_64_10, Bacteria
|
Not on your lists |
15725..16627
|
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria
|
Not on your lists |
16684..16887
|
Response regulator receiver protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPD9_KORVE
response regulator receiver protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(16927..17511)
|
Sortase family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023B0_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
sortase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_21
unknown
|
Not on your lists |
comp(17517..18065)
|
This feature has no annotations |
|
PLM4_65_b1_redo_sep16_scaffold_1710_22
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18255..18674
|
Sigma-54 dependent DNA-binding response regulator Tax=Burkholderia glumae (strain BGR1) RepID=C5ADA5_BURGB
Sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:ACR28150.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_23
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18721..20058)
|
Response regulator in two-component reguatory system (EBP family) Tax=Ralstonia solanacearum SD54 RepID=V5AJE1_RALSL
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Probable sigma-54 interacting response regulator transcription regulator protein {ECO:0000313|EMBL:CAD18818.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum).;"
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(20063..21832)
|
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003638A8B
signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_25
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria
|
Not on your lists |
comp(21904..22542)
|
Tax=RBG_13_Caldithrix_44_9_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
22823..23287
|
Transport-associated protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMW7_9BACT
Transport-associated protein {ECO:0000313|EMBL:EEF58763.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
23491..23781
|
chaperonin Cpn10
10 kDa chaperonin bin=GWC2_Methylomirabilis_70_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Acidobacteria_70_10_curated
|
|
PLM4_65_b1_redo_sep16_scaffold_1710_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
23800..24096
|
groEL; chaperonin GroEL; K04077 chaperonin GroEL bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
groEL; chaperonin GroEL
Tax=RBG_16_Acidobacteria_70_10_curated
|