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PLM4_65_b1_redo_sep16_scaffold_2719

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2719_1
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(2..103)
DNA (102bp) protein (34aa)
Glycosyl hydrolase Tax=uncultured Acidobacteria bacterium RepID=H5SG40_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL55126.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
PLM4_65_b1_redo_sep16_scaffold_2719_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(223..1620)
DNA (1398bp) protein (466aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Glucose-6-phosphate 1-dehydrogenase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DC18_SINAD
glucose-6-phosphate 1-dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_2719_3

Not on your lists

comp(1617..2651)
DNA (1035bp) protein (345aa)
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:CBH99859.1}; EC=1.1.1.44 {ECO:0000313|EMBL:CBH99859.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase (Decarboxylating) Tax=mine drainage metagenome RepID=E6PY50_9ZZZZ
PLM4_65_b1_redo_sep16_scaffold_2719_4
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(2636..3007)
DNA (372bp) protein (124aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Halosarcina pallida JCM 14848 RepID=M0CXF5_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=CG_Anaero_04
PLM4_65_b1_redo_sep16_scaffold_2719_5
unknown

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comp(2986..3567)
DNA (582bp) protein (194aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2719_6
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3564..5048)
DNA (1485bp) protein (495aa)
Trypsin-like serine protease bin=GWA2_OP3_52_12 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
protease Do
Tax=CSP1_8_Deltaproteobacteria
PLM4_65_b1_redo_sep16_scaffold_2719_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(5093..5839)
DNA (747bp) protein (249aa)
Putative phospholipid-binding domain protein Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC81_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2719_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(5981..7387)
DNA (1407bp) protein (469aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVS6_OPITP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_2719_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(7368..8042)
DNA (675bp) protein (225aa)
OmpR family two-component response regulator Tax=Desulfovibrio magneticus RepID=C4XS15_DESMR
OmpR family two-component response regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_65_b1_redo_sep16_scaffold_2719_10
unknown

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comp(8099..8533)
DNA (435bp) protein (145aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_2719_11
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

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comp(8839..9306)
DNA (468bp) protein (156aa)
Taurine-transporting ATPase {ECO:0000313|EMBL:EHC19440.1}; EC=3.6.3.36 {ECO:0000313|EMBL:EHC19440.1};; species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
Taurine-transporting ATPase Tax=Fischerella sp. JSC-11 RepID=G6FN10_9CYAN
ABC transporter ATP-binding protein
PLM4_65_b1_redo_sep16_scaffold_2719_12
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9317..10060)
DNA (744bp) protein (248aa)
Putative nitrate transport ATP-binding protein NrtD Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZUF4_9ACTO
Putative nitrate transport ATP-binding protein NrtD {ECO:0000313|EMBL:EPH42030.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
ABC transporter
PLM4_65_b1_redo_sep16_scaffold_2719_13
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10053..11753)
DNA (1701bp) protein (567aa)
Binding-protein-dependent transport systems inner membrane component Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLF0_MOOTA
binding-protein dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABC18739.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
PLM4_65_b1_redo_sep16_scaffold_2719_14
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11750..12709)
DNA (960bp) protein (320aa)
Serine phosphatase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSV6_METHJ
serine phosphatase
Serine phosphatase {ECO:0000313|EMBL:ABD42916.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
PLM4_65_b1_redo_sep16_scaffold_2719_15
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(12706..14910)
DNA (2205bp) protein (735aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001746B91
hypothetical protein
Tax=CG_Arma_01
PLM4_65_b1_redo_sep16_scaffold_2719_16
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14996..15313)
DNA (318bp) protein (106aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000375D5C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76752.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
PLM4_65_b1_redo_sep16_scaffold_2719_17
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15510..16343)
DNA (834bp) protein (278aa)
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
diaminopimelate epimerase (EC:5.1.1.7)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2719_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16340..17347)
DNA (1008bp) protein (336aa)
BNR/Asp-box repeat-containing protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2719_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17344..17829)
DNA (486bp) protein (162aa)
Histidine triad (HIT) protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G608_CHLAD
histidine triad (HIT) protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2719_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(17831..19180)
DNA (1350bp) protein (450aa)
GAF sensor-containing adenylate/guanylate cyclase bin=bin3_NC10 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_2719_21
unknown

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19453..19665
DNA (213bp) protein (71aa)

This feature has no annotations

Displaying 21 items

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