ggKbase home page

PLM3-1_170_b1_sep16_scaffold_40362

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_40362_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41..934)
DNA (894bp) protein (298aa)
Histone deacetylase superfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A43_SOLUE bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
histone deacetylase superfamily protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_40362_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1076..1567)
DNA (492bp) protein (164aa)
pts; 6-pyruvoyl tetrahydropterin synthase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
pts; 6-pyruvoyl tetrahydropterin synthase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_40362_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1705..1908
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cold-shock DNA-binding protein family protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_40362_4
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1912..2133
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YS01_9ALTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ05001.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
PLM3-1_170_b1_sep16_scaffold_40362_5
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2178..3059
DNA (882bp) protein (294aa)
Putative uncharacterized protein Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YS01_9ALTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ05001.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_40362_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3267..3827
DNA (561bp) protein (187aa)
putative undecaprenyl-diphosphatase (EC:3.6.1.27)
Putative Undecaprenyl-diphosphatase {ECO:0000313|EMBL:CBK42632.1}; EC=3.6.1.27 {ECO:0000313|EMBL:CBK42632.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Undecaprenyl-diphosphatase Tax=Candidatus Nitrospira defluvii RepID=D8PH95_9BACT
PLM3-1_170_b1_sep16_scaffold_40362_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3824..4135
DNA (312bp) protein (104aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI0003183DD2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 7 items

View Taxonomy