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PLM3-1_170_b1_sep16_scaffold_2383

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2383_1
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..218)
DNA (216bp) protein (72aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:ABL83528.1}; EC=1.2.1.10 {ECO:0000313|EMBL:ABL83528.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Acetaldehyde dehydrogenase Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SNZ3_NOCSJ
PLM3-1_170_b1_sep16_scaffold_2383_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(407..619)
DNA (213bp) protein (71aa)
Ethanolamine utilization protein EutN bin=GWB2_Chloroflexi_54_36 species=Kineosphaera limosa genus=Kineosphaera taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_2383_3
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(946..1683)
DNA (738bp) protein (246aa)
Deoxyribose-phosphate aldolase bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
deoxyribose-phosphate aldolase
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_2383_4
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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comp(1726..2421)
DNA (696bp) protein (232aa)
ribose-5-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ribose-5-phosphate isomerase (EC:5.3.1.6)
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_2383_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2429..3019)
DNA (591bp) protein (197aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
signal peptidase I (EC:3.4.21.89)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2383_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(3103..3864)
DNA (762bp) protein (254aa)
Putative methyltransferase bin=GWC2_Chloroflexi_49_37 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative methyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2383_7
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(3940..4335)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUA1_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH85198.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_2383_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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comp(4699..4998)
DNA (300bp) protein (100aa)
Putative ArsR family transcriptional regulator bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative ArsR family transcriptional regulator
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM3-1_170_b1_sep16_scaffold_2383_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(5099..5653)
DNA (555bp) protein (185aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=uncultured Chloroflexi bacterium RepID=Q2Z018_9CHLR
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_2383_10
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(5640..7370)
DNA (1731bp) protein (577aa)
Hypothetical membrane protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_01
PLM3-1_170_b1_sep16_scaffold_2383_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

7464..8930
DNA (1467bp) protein (489aa)
glycosyl transferase family protein bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative glycosyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2383_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

9033..10193
DNA (1161bp) protein (387aa)
glycosyl transferase family protein bin=bin1_lowGC species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
family 2 glycosyl transferase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_2383_13
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10190..10519
DNA (330bp) protein (110aa)
Glycosyl transferase family 2 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X6_CHLAD
glycosyl transferase family 2 protein
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACL23609.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Displaying 13 items

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