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PLM3-1_170_b1_sep16_scaffold_701

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_701_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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3..1130
DNA (1128bp) protein (376aa)
putative aspartate aminotransferase (EC:2.6.1.1)
Putative aspartate aminotransferase bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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1132..1539
DNA (408bp) protein (136aa)
DNA polymerase beta domain-containing protein region
Similar to tr|Q3CJ33|Q3CJ33_THEET DNA polymerase bin=GWC2_Methylomirabilis_70_16 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_701_3
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

1529..2011
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BJI9_THEXL
hypothetical protein
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_701_4
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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2023..2217
DNA (195bp) protein (65aa)
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM3-1_170_b1_sep16_scaffold_701_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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2214..2450
DNA (237bp) protein (79aa)
hypothetical protein bin=CNBR_ACIDO species=Leptospira sp. B5-022 genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_6
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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2463..3995
DNA (1533bp) protein (511aa)
atm:ANT_24690 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_701_7
unknown

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4048..4599
DNA (552bp) protein (184aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_701_8
unknown

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4631..4807
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_701_9
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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4966..5187
DNA (222bp) protein (74aa)
hypothetical protein Tax=Actinopolyspora mortivallis RepID=UPI00036582E6
Tax=RBG_13_Chloroflexi_60_13_curated
PLM3-1_170_b1_sep16_scaffold_701_10
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5177..5698)
DNA (522bp) protein (174aa)
Putative transposase Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8V6_AROAE
tnpF1; transposase, fragment
Putative transposase {ECO:0000313|EMBL:CAI06253.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM3-1_170_b1_sep16_scaffold_701_11
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

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comp(5749..6132)
DNA (384bp) protein (128aa)
Transposase Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZAU4_ANACC
transposase
Transposase {ECO:0000313|EMBL:AFZ56318.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
PLM3-1_170_b1_sep16_scaffold_701_12
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

6300..7151
DNA (852bp) protein (284aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037EC9C2
hypothetical protein
Tax=RBG_16_Chloroflexi_47_49_curated
PLM3-1_170_b1_sep16_scaffold_701_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(7204..7404)
DNA (201bp) protein (67aa)
Helicase, RecD/TraA family Tax=Chloroflexus RepID=A9WGW5_CHLAA
helicase, RecD/TraA family
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_14
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7395..8006)
DNA (612bp) protein (204aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI000369CA10
uncharacterized conserved protein
Tax=CG_Dehalo_02
PLM3-1_170_b1_sep16_scaffold_701_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8148..10316)
DNA (2169bp) protein (723aa)
helicase RecD/TraA (EC:3.1.11.5)
helicase Tax=Nocardiopsis potens RepID=UPI0003494F24
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_16
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

10431..11471
DNA (1041bp) protein (347aa)
holB; putative DNA polymerase III delta' subunit (EC:2.7.7.7)
DNA polymerase III subunit delta' bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_701_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12113..13474
DNA (1362bp) protein (454aa)
atm:ANT_19080 dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dnaA; chromosomal replication initiator protein DnaA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(14051..14920)
DNA (870bp) protein (290aa)
Putative RNA methyltransferase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
tRNA/rRNA methyltransferase SpoU
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_701_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(14930..15505)
DNA (576bp) protein (192aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI0003627A6A
Appr-1-p processing domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_20
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(15595..15942)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYE8_ANATU
rplT; 50S ribosomal protein L20
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_701_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists


comp(16041..16295)
DNA (255bp) protein (85aa)
rpmI; putative 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rpmI; putative 50S ribosomal protein L35
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_22
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(16393..16857)
DNA (465bp) protein (155aa)
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
infC; translation initiation factor IF-3
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_701_23
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(17034..17981)
DNA (948bp) protein (316aa)
L-asparaginase II family protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
L-asparaginase II family protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3-1_170_b1_sep16_scaffold_701_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(18040..18867)
DNA (828bp) protein (276aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_701_25
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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comp(18901..19257)
DNA (357bp) protein (119aa)
atm:ANT_06880 putative two-component sensor histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
two-component sensor histidine kinase
Tax=RBG_13_Chloroflexi_68_17_curated
Displaying 25 items

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