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PLM6_170_b1_sep16_Chloroflexi_61_13

PLM3-1_170cm_b1_sep2016_Chloroflexi_61_13
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 251-300 of 331 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_6977
Domain: Bacteria (100%)
5 5592 bp 62.04 12.74 92.97
PLM3-1_170_b1_sep16_scaffold_9848
Domain: Bacteria (90.91%)
11 9005 bp 60.36 14.03 93.05
PLM3-1_170_b1_sep16_scaffold_1615
Domain: Bacteria (88.89%)
9 11769 bp 60.87 12.41 93.14
PLM3-1_170_b1_sep16_scaffold_990
Domain: Bacteria (81.25%)
16 14939 bp 62.96 13.07 93.22
PLM3-1_170_b1_sep16_scaffold_2857
Domain: Bacteria (88.89%)
9 8865 bp 63.11 16.77 93.37
PLM3-1_170_b1_sep16_scaffold_21182
Species: RBG_19FT_COMBO_Chloroflexi_55_16_curated (50%)
4 3052 bp 62.81 13.02 93.48
PLM3-1_170_b1_sep16_scaffold_4177
Phylum: Chloroflexi (70%)
20 17187 bp 60.57 13.48 93.49
PLM3-1_170_b1_sep16_scaffold_4295
Phylum: Chloroflexi (100%)
7 7190 bp 60.42 10.95 93.55
PLM3-1_170_b1_sep16_scaffold_747
Phylum: Chloroflexi (80%)
20 19285 bp 60.86 13.49 93.59
PLM3-1_170_b1_sep16_scaffold_16739
Phylum: Chloroflexi (100%)
5 3992 bp 61.92 13.11 93.71
PLM3-1_170_b1_sep16_scaffold_4187
Phylum: Chloroflexi (71.43%)
7 7263 bp 64.20 11.44 93.80
PLM3-1_170_b1_sep16_scaffold_1832
Phylum: Chloroflexi (87.5%)
24 25950 bp 61.39 14.23 93.83
PLM3-1_170_b1_sep16_scaffold_8144
Phylum: Chloroflexi (88.89%)
9 6352 bp 60.58 9.66 93.84
PLM3-1_170_b1_sep16_scaffold_1756
Phylum: Chloroflexi (60%)
10 11270 bp 61.77 12.75 93.86
PLM3-1_170_b1_sep16_scaffold_5360
Phylum: Chloroflexi (71.43%)
7 6435 bp 62.28 16.11 93.89
PLM3-1_170_b1_sep16_scaffold_12485
Phylum: Chloroflexi (66.67%)
3 4086 bp 61.75 10.24 93.91
PLM3-1_170_b1_sep16_scaffold_2399
Phylum: Chloroflexi (66.67%)
15 16755 bp 62.21 12.25 93.93
PLM3-1_170_b1_sep16_scaffold_12176
Phylum: Chloroflexi (50%)
8 4846 bp 62.84 14.98 93.95
PLM3-1_170_b1_sep16_scaffold_3142
Species: RBG_16_Chloroflexi_63_12_curated (50%)
10 8445 bp 63.01 14.99 93.96
PLM3-1_170_b1_sep16_scaffold_1653
Domain: Bacteria (78.57%)
14 14716 bp 61.63 15.37 94.10
PLM3-1_170_b1_sep16_scaffold_2510
Domain: Bacteria (80%)
10 10382 bp 59.93 13.42 94.11
PLM3-1_170_b1_sep16_scaffold_3575
Phylum: Chloroflexi (75%)
16 15282 bp 62.39 13.80 94.17
PLM3-1_170_b1_sep16_scaffold_1368
Phylum: Chloroflexi (100%)
27 13670 bp 62.41 15.00 94.26
PLM3-1_170_b1_sep16_scaffold_12240
Domain: Bacteria (60%)
5 4129 bp 64.11 11.08 94.31
PLM3-1_170_b1_sep16_scaffold_2651
Phylum: Chloroflexi (52.63%)
19 22679 bp 61.65 13.33 94.34
PLM3-1_170_b1_sep16_scaffold_17967
Phylum: Chloroflexi (88.89%)
9 8486 bp 60.29 13.26 94.36
PLM3-1_170_b1_sep16_scaffold_5943
Phylum: Chloroflexi (60%)
5 6089 bp 61.83 13.75 94.45
PLM3-1_170_b1_sep16_scaffold_16408
Phylum: Chloroflexi (66.67%)
3 3520 bp 63.01 15.00 94.52
PLM3-1_170_b1_sep16_scaffold_981
Phylum: Chloroflexi (68%)
25 28157 bp 62.36 14.36 94.56
PLM3-1_170_b1_sep16_scaffold_20549
Domain: Bacteria (66.67%)
6 4898 bp 62.62 14.30 94.57
PLM3-1_170_b1_sep16_scaffold_748
Phylum: Chloroflexi (50%)
18 16800 bp 62.06 11.63 94.59
PLM3-1_170_b1_sep16_scaffold_932
Phylum: Chloroflexi (69.23%)
13 15338 bp 61.79 15.80 94.63
PLM3-1_170_b1_sep16_scaffold_2300
Phylum: Chloroflexi (69.23%)
13 12543 bp 62.39 14.09 94.64
PLM3-1_170_b1_sep16_scaffold_2029
Species: RBG_19FT_COMBO_Chloroflexi_62_14_curated (50%)
8 10527 bp 62.02 14.05 94.67
PLM3-1_170_b1_sep16_scaffold_9387
Domain: Bacteria (80%)
5 4781 bp 61.64 11.61 94.75
PLM3-1_170_b1_sep16_scaffold_11963
Order: Anaerolineales (50%)
4 4182 bp 60.26 12.23 94.76
PLM3-1_170_b1_sep16_scaffold_551
Phylum: Chloroflexi (52.94%)
17 19048 bp 62.31 14.64 94.78
PLM3-1_170_b1_sep16_scaffold_43303
Phylum: Chloroflexi (83.33%)
6 4754 bp 60.10 12.37 94.78
PLM3-1_170_b1_sep16_scaffold_2861
Phylum: Chloroflexi (100%)
6 8858 bp 59.73 15.19 94.83
PLM3-1_170_b1_sep16_scaffold_6486
Domain: Bacteria (88.89%)
9 11676 bp 61.71 11.33 94.89
PLM3-1_170_b1_sep16_scaffold_395
Domain: Bacteria (80.95%)
21 21755 bp 61.48 13.68 95.03
PLM3-1_170_b1_sep16_scaffold_18653
Phylum: Chloroflexi (100%)
3 3273 bp 62.48 13.38 95.14
PLM3-1_170_b1_sep16_scaffold_2929
Phylum: Chloroflexi (50%)
8 8734 bp 60.41 14.96 95.21
PLM3-1_170_b1_sep16_scaffold_7539
Phylum: Chloroflexi (71.43%)
7 5384 bp 61.11 15.46 95.36
PLM3-1_170_b1_sep16_scaffold_105
Phylum: Chloroflexi (70%)
30 37851 bp 60.81 13.54 95.40
PLM3-1_170_b1_sep16_scaffold_14924
Species: RBG_16_Chloroflexi_63_12_curated (50%)
4 3710 bp 61.13 12.25 95.42
PLM3-1_170_b1_sep16_scaffold_2907
Phylum: Chloroflexi (50%)
8 8761 bp 61.57 12.29 95.50
PLM3-1_170_b1_sep16_scaffold_4766
Phylum: Chloroflexi (66.67%)
6 6803 bp 64.41 14.93 95.56
PLM3-1_170_b1_sep16_scaffold_7585
Domain: Bacteria (100%)
5 5363 bp 61.46 12.98 95.66
PLM3-1_170_b1_sep16_scaffold_15334
Phylum: Chloroflexi (50%)
4 3653 bp 61.73 12.40 95.76
Displaying items 251-300 of 331 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.