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PLM6_170_b1_sep16_Chloroflexi_61_13

PLM3-1_170cm_b1_sep2016_Chloroflexi_61_13
In projects: PLM3-1_170cm_b1_sep2016  |  PLM2016-drep98-anvio  |  PLM2016-NC-80p

Consensus taxonomy: Chloroflexi  →  Bacteria

Displaying items 101-150 of 331 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
PLM3-1_170_b1_sep16_scaffold_1035
Phylum: Chloroflexi (80%)
10 14595 bp 61.56 14.30 86.82
PLM3-1_170_b1_sep16_scaffold_5416
Phylum: Chloroflexi (70%)
10 6395 bp 60.38 13.44 86.83
PLM3-1_170_b1_sep16_scaffold_701
Phylum: Chloroflexi (76%)
25 19257 bp 61.04 13.37 86.85
PLM3-1_170_b1_sep16_scaffold_261
Phylum: Chloroflexi (54.05%)
37 34571 bp 59.60 12.56 86.86
PLM3-1_170_b1_sep16_scaffold_4422
Phylum: Chloroflexi (93.33%)
15 15486 bp 62.39 15.32 86.98
PLM3-1_170_b1_sep16_scaffold_3084
Phylum: Chloroflexi (56.76%)
37 29052 bp 61.96 13.89 86.99
PLM3-1_170_b1_sep16_scaffold_2383
Phylum: Chloroflexi (92.31%)
13 10520 bp 61.53 12.96 87.03
PLM3-1_170_b1_sep16_scaffold_6658
Phylum: Chloroflexi (70%)
10 8700 bp 60.79 11.02 87.03
PLM3-1_170_b1_sep16_scaffold_735
Domain: Bacteria (52.17%)
46 45366 bp 59.70 13.05 87.05
PLM3-1_170_b1_sep16_scaffold_2495
Domain: Bacteria (80%)
10 9496 bp 61.11 13.98 87.10
PLM3-1_170_b1_sep16_scaffold_8391
Domain: Bacteria (100%)
5 5070 bp 61.10 12.16 87.22
PLM3-1_170_b1_sep16_scaffold_4102
Phylum: Chloroflexi (57.14%)
21 16958 bp 61.42 13.34 87.23
PLM3-1_170_b1_sep16_scaffold_402
Phylum: Chloroflexi (50%)
20 21579 bp 60.80 12.74 87.25
PLM3-1_170_b1_sep16_scaffold_11145
Phylum: Chloroflexi (57.14%)
7 6239 bp 62.73 11.06 87.42
PLM3-1_170_b1_sep16_scaffold_8055
Domain: Bacteria (77.78%)
18 15909 bp 59.77 13.27 87.48
PLM3-1_170_b1_sep16_scaffold_27361
Phylum: Chloroflexi (75%)
4 3442 bp 61.19 9.81 87.51
PLM3-1_170_b1_sep16_scaffold_7111
Phylum: Chloroflexi (80%)
5 8310 bp 62.71 11.81 87.65
PLM3-1_170_b1_sep16_scaffold_2040
Phylum: Chloroflexi (50%)
12 14305 bp 60.94 13.65 87.77
PLM3-1_170_b1_sep16_scaffold_11474
Species: RBG_16_Chloroflexi_63_12_curated (62.5%)
8 7373 bp 61.06 13.12 87.81
PLM3-1_170_b1_sep16_scaffold_8127
Phylum: Chloroflexi (87.5%)
8 5172 bp 61.52 12.50 87.84
PLM3-1_170_b1_sep16_scaffold_9217
Phylum: Chloroflexi (50%)
8 7030 bp 60.60 13.49 87.87
PLM3-1_170_b1_sep16_scaffold_4992
Phylum: Chloroflexi (71.43%)
7 6651 bp 61.27 16.91 88.00
PLM3-1_170_b1_sep16_scaffold_3770
Phylum: Chloroflexi (100%)
9 7690 bp 62.31 12.93 88.01
PLM3-1_170_b1_sep16_scaffold_8811
Phylum: Chloroflexi (80%)
5 5407 bp 62.09 14.95 88.05
PLM3-1_170_b1_sep16_scaffold_5230
Phylum: Chloroflexi (54.55%)
11 10013 bp 61.78 15.40 88.06
PLM3-1_170_b1_sep16_scaffold_8951
Phylum: Chloroflexi (58.33%)
12 10083 bp 61.95 11.65 88.07
PLM3-1_170_b1_sep16_scaffold_122
Phylum: Chloroflexi (72.22%)
54 48916 bp 60.17 13.04 88.08
PLM3-1_170_b1_sep16_scaffold_2102
Phylum: Chloroflexi (91.67%)
12 12247 bp 61.20 13.50 88.09
PLM3-1_170_b1_sep16_scaffold_1389
Domain: Bacteria (86.36%)
22 17563 bp 59.35 13.77 88.17
PLM3-1_170_b1_sep16_scaffold_494
Domain: Bacteria (82.61%)
23 23815 bp 59.10 12.02 88.18
PLM3-1_170_b1_sep16_scaffold_3875
Phylum: Chloroflexi (90%)
10 7564 bp 61.92 11.90 88.21
PLM3-1_170_b1_sep16_scaffold_891
Phylum: Chloroflexi (72.22%)
18 20727 bp 59.97 12.84 88.22
PLM3-1_170_b1_sep16_scaffold_4355
Domain: Bacteria (90%)
10 8089 bp 60.03 15.80 88.24
PLM3-1_170_b1_sep16_scaffold_333
Phylum: Chloroflexi (55.26%)
38 32730 bp 60.55 12.67 88.29
PLM3-1_170_b1_sep16_scaffold_10083
Phylum: Chloroflexi (52.63%)
19 14174 bp 59.08 13.30 88.34
PLM3-1_170_b1_sep16_scaffold_3775
Phylum: Chloroflexi (85.71%)
7 7685 bp 62.72 15.54 88.38
PLM3-1_170_b1_sep16_scaffold_1019
Phylum: Chloroflexi (78.57%)
14 14716 bp 61.78 15.75 88.39
PLM3-1_170_b1_sep16_scaffold_2771
Phylum: Chloroflexi (70.59%)
17 14339 bp 62.78 13.45 88.42
PLM3-1_170_b1_sep16_scaffold_3798
Phylum: Chloroflexi (62.5%)
8 7660 bp 60.09 11.57 88.43
PLM3-1_170_b1_sep16_scaffold_1495
Domain: Bacteria (64.29%)
14 12297 bp 61.42 14.67 88.44
PLM3-1_170_b1_sep16_scaffold_723
Phylum: Chloroflexi (70.97%)
31 27385 bp 60.81 14.62 88.44
PLM3-1_170_b1_sep16_scaffold_526
Domain: Bacteria (66.67%)
18 20681 bp 61.63 14.47 88.44
PLM3-1_170_b1_sep16_scaffold_1078
Phylum: Chloroflexi (68.29%)
41 37589 bp 61.43 13.85 88.45
PLM3-1_170_b1_sep16_scaffold_408
Phylum: Chloroflexi (52.17%)
23 31435 bp 59.61 12.79 88.46
PLM3-1_170_b1_sep16_scaffold_2745
Phylum: Chloroflexi (66.67%)
27 39473 bp 61.90 13.30 88.47
PLM3-1_170_b1_sep16_scaffold_6879
Species: RBG_16_Chloroflexi_63_12_curated (66.67%)
6 5631 bp 62.19 14.44 88.49
PLM3-1_170_b1_sep16_scaffold_47237
Species: RBG_13_Chloroflexi_68_17_curated (75%)
4 3161 bp 63.02 13.05 88.55
PLM3-1_170_b1_sep16_scaffold_13769
Phylum: Chloroflexi (62.5%)
8 5816 bp 59.35 15.71 88.62
PLM3-1_170_b1_sep16_scaffold_8143
Phylum: Chloroflexi (57.14%)
14 9140 bp 59.87 13.16 88.62
PLM3-1_170_b1_sep16_scaffold_8056
Phylum: Chloroflexi (100%)
7 5199 bp 61.84 12.78 88.75
Displaying items 101-150 of 331 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.