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PLM3-1_170_b1_sep16_scaffold_2885

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2885_1
unknown

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412..696
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2885_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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751..1035
DNA (285bp) protein (95aa)
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3-1_170_b1_sep16_scaffold_2885_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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1151..1699
DNA (549bp) protein (183aa)
Sigma-24, ECF subfamily Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW7_KORVE
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_2885_4
unknown

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1692..2252
DNA (561bp) protein (187aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2885_5
unknown

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2306..2560
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2885_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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2557..3213
DNA (657bp) protein (219aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QF15_9FIRM
type 11 methyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_2885_7

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3225..3713
DNA (489bp) protein (163aa)
Blue (Type 1) copper domain protein Tax=Frankia sp. (strain EuI1c) RepID=E3J582_FRASU
Uncharacterized protein {ECO:0000313|EMBL:KKK98293.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
blue (type 1) copper domain-containing protein
PLM3-1_170_b1_sep16_scaffold_2885_8
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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4064..4582
DNA (519bp) protein (173aa)
Putative hydrolase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3K2_9ACTN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAN03423.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM3-1_170_b1_sep16_scaffold_2885_9

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comp(4601..4780)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM68638.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_2885_10

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comp(4780..5289)
DNA (510bp) protein (170aa)
HTH-type transcriptional regulator RghR Tax=Bacillus sonorensis L12 RepID=M5PBR5_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKM68637.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rghR1; HTH-type transcriptional regulator RghR
PLM3-1_170_b1_sep16_scaffold_2885_11

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comp(5510..5893)
DNA (384bp) protein (128aa)
Putative transcriptional regulator Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKM68635.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
helix-turn-helix domain-containing protein
PLM3-1_170_b1_sep16_scaffold_2885_12

Not on your lists

comp(5907..6827)
DNA (921bp) protein (307aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM07820.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
atm:ANT_20670 putative bacterial type II secretion system protein; K12511 tight adherence protein C bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
type II secretion system protein
PLM3-1_170_b1_sep16_scaffold_2885_13
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(6836..7816)
DNA (981bp) protein (327aa)
Type II secretion system protein Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR3_9FIRM
type II secretion system F domain protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_2885_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(7820..8776)
DNA (957bp) protein (319aa)
Type II secretion system protein E bin=GWC2_ACD39_50_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
type II secretion system protein E
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_2885_15

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comp(9252..9932)
DNA (681bp) protein (227aa)
Response regulator receiver protein Tax=Thermincola potens (strain JR) RepID=D5XCW6_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KKL70378.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver protein
PLM3-1_170_b1_sep16_scaffold_2885_16
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(9979..10362)
DNA (384bp) protein (128aa)
histidine kinase Tax=Dehalobacter sp. E1 RepID=UPI00030F7406
histidine kinase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_2885_17
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(10407..10895)
DNA (489bp) protein (163aa)
Flp pilus assembly protein CpaB Tax=Pseudomonas geniculata RepID=UPI00029B42A1
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
Displaying 17 items

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