ggKbase home page

PLM3-1_170_b1_sep16_scaffold_54460

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_54460_1
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..542)
DNA (540bp) protein (180aa)
Malate dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2T1_SPHTD
malate dehydrogenase, NAD-dependent
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_54460_2

Not on your lists

comp(713..1609)
DNA (897bp) protein (299aa)
Isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD(+)) Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K408_DEHLB
Uncharacterized protein {ECO:0000313|EMBL:KKL73110.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_54460_3
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1727..1924)
DNA (198bp) protein (66aa)
Cephalosporin hydroxylase CmcI Tax=Bacillus cereus MC118 RepID=R8JDU0_BACCE
Cephalosporin hydroxylase CmcI {ECO:0000313|EMBL:EOO95426.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus MC118.;"
putative cephalosporin hydroxylase CmcI
PLM3-1_170_b1_sep16_scaffold_54460_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2376..3668)
DNA (1293bp) protein (431aa)
aconitate hydratase (EC:4.2.1.3)
Aconitase {ECO:0000313|EMBL:ABG03589.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ABG03589.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Aconitase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYD9_RUBXD
PLM3-1_170_b1_sep16_scaffold_54460_5
unknown

Not on your lists

4074..4271
DNA (198bp) protein (66aa)
PLM3-1_170_b1_sep16_scaffold_54460_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4734..4946
DNA (213bp) protein (71aa)
Predicted protein Tax=Brucella suis bv. 3 str. 686 RepID=D0PN08_BRUSS
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_54460_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5401..5574
DNA (174bp) protein (58aa)
Transcription regulator, AsnC-type Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C2D1_THEGP
transcription regulator, AsnC-type
Tax=RBG_16_Desulfobacca_60_12_curated
Displaying 7 items

View Taxonomy