ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_5599

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_5599_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

363..965
DNA (603bp) protein (201aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377FAE5
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:AEA24263.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_5599_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

969..1562
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0Y8_9ACTO
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:ADB74720.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_5599_3
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1836..2501
DNA (666bp) protein (222aa)
type 12 methyltransferase Tax=Saccharomonospora halophila RepID=UPI00036AAAC9
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEM85612.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_60_b1_redo_sep16_scaffold_5599_4
unknown

Not on your lists

comp(2716..3051)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5599_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3437..3694)
DNA (258bp) protein (86aa)
Group II intron maturase-specific domain protein (Fragment) Tax=Frankia sp. EUN1f RepID=D3DEE3_9ACTO
Group II intron maturase-specific domain protein {ECO:0000313|EMBL:EFC78715.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
RNA-directed DNA polymerase
PLM1_60_b1_redo_sep16_scaffold_5599_6
unknown

Not on your lists

comp(3691..4383)
DNA (693bp) protein (231aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_5599_7
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4380..5204)
DNA (825bp) protein (275aa)
transposase Tax=Saccharopolyspora spinosa RepID=UPI0002378ED4
Transposase {ECO:0000313|EMBL:EWM14535.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
transposase IS4 family protein
PLM1_60_b1_redo_sep16_scaffold_5599_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5425..5967
DNA (543bp) protein (181aa)
RNA-directed DNA polymerase Tax=Saccharopolyspora spinosa RepID=UPI000237B332
RNA-directed DNA polymerase
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:ABW12815.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_5599_9
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6464..6745)
DNA (282bp) protein (94aa)
Acetyltransferase Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BYA2_BEUC1
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ACQ81002.1}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
PLM1_60_b1_redo_sep16_scaffold_5599_10
unknown

Not on your lists

7324..8112
DNA (789bp) protein (263aa)

This feature has no annotations

Displaying 10 items

View Taxonomy