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PLM1_60_b1_redo_sep16_scaffold_286

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_286_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

130..936
DNA (807bp) protein (269aa)
Dienelactone hydrolase and related enzymes Tax=uncultured actinobacterium HF4000_04C13 RepID=E0XVD4_9ACTN
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EXG80306.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_286_2

Not on your lists

comp(1001..2728)
DNA (1728bp) protein (576aa)
Basic proline-rich protein Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VVH9_9BACT
Basic proline-rich protein {ECO:0000313|EMBL:AGC71311.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_515.;"
PLM1_60_b1_redo_sep16_scaffold_286_3
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2812..4377)
DNA (1566bp) protein (522aa)
cobQ; cobyric acid synthase (EC:6.3.5.10)
cobyric acid synthase Tax=Actinokineospora enzanensis RepID=UPI00037726CE
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
PLM1_60_b1_redo_sep16_scaffold_286_4
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4374..5375)
DNA (1002bp) protein (334aa)
cobalamin biosynthesis protein Tax=Salinispora tropica RepID=UPI000364CE94
cobD; cobalamin biosynthesis protein
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_286_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5533..5985)
DNA (453bp) protein (151aa)
single-stranded DNA-binding protein Tax=Longispora albida RepID=UPI00037B55CF
Single-stranded DNA-binding protein {ECO:0000313|EMBL:EXG80300.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ssb; ssDNA-binding protein
PLM1_60_b1_redo_sep16_scaffold_286_6
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6210..7835)
DNA (1626bp) protein (542aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000360218A
peptidase
Peptidase {ECO:0000313|EMBL:AJF65252.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM1_60_b1_redo_sep16_scaffold_286_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7955..8506)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KZ58_9ACTO
Acetyltransferase {ECO:0000313|EMBL:EXG80299.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
GCN5-like N-acetyltransferase
PLM1_60_b1_redo_sep16_scaffold_286_8
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8597..9205)
DNA (609bp) protein (203aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000377020B
Panthothenate kinase {ECO:0000313|EMBL:EXG79642.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
frcK; fructose transport system kinase
PLM1_60_b1_redo_sep16_scaffold_286_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9202..10110)
DNA (909bp) protein (303aa)
PfkB domain protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB01_NAKMY
Sugar kinase, ribokinase {ECO:0000313|EMBL:EXG79643.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PfkB domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_286_trna_1
unknown

Not on your lists

10425..10497
DNA (73bp)
transferRNA Arg
PLM1_60_b1_redo_sep16_scaffold_286_10
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10876..11133
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB54_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88414.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_286_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11180..11638
DNA (459bp) protein (153aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000347F3B4
DoxX family protein {ECO:0000313|EMBL:EOD66925.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
DoxX family protein
PLM1_60_b1_redo_sep16_scaffold_286_12
unknown

Not on your lists

11775..11933
DNA (159bp) protein (53aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_286_13
unknown

Not on your lists

comp(11930..12151)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_286_14
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12316..12519)
DNA (204bp) protein (68aa)
cold-shock protein Tax=Frankia sp. Iso899 RepID=UPI0003B426C6
cold-shock DNA-binding protein family
SPG23_c4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS28936.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
PLM1_60_b1_redo_sep16_scaffold_286_15
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13125..13802
DNA (678bp) protein (226aa)
Secreted protein Tax=Streptomyces sp. C RepID=D9VRT3_9ACTO
secreted protein
Secreted protein {ECO:0000313|EMBL:AHH96878.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_286_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14525..14962
DNA (438bp) protein (146aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003701EF0
MerR family transcriptional regulator {ECO:0000313|EMBL:ETK37864.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
DNA binding domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_286_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14959..15828
DNA (870bp) protein (290aa)
alpha/beta hydrolase Tax=Actinopolymorpha alba RepID=UPI00036A434F
Alpha/beta hydrolase {ECO:0000313|EMBL:ETK37863.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alpha/beta hydrolase fold protein
PLM1_60_b1_redo_sep16_scaffold_286_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15851..16519
DNA (669bp) protein (223aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Salinispora pacifica RepID=UPI0003755C14
tRNA (guanine-n(7)-)-methyltransferase
PLM1_60_b1_redo_sep16_scaffold_286_19
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16550..16945
DNA (396bp) protein (132aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI0003619ADE
hypothetical protein
Winged helix DNA-binding domain protein {ECO:0000313|EMBL:AFR07971.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;"
PLM1_60_b1_redo_sep16_scaffold_286_20
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16942..17517)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000380B949
Uncharacterized protein {ECO:0000313|EMBL:EWC58074.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
membrane protein
PLM1_60_b1_redo_sep16_scaffold_286_21
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17514..18302)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000375DBF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWC62249.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
PLM1_60_b1_redo_sep16_scaffold_286_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18307..18849)
DNA (543bp) protein (181aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI000375DBF4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ40193.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_286_23
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18846..19655)
DNA (810bp) protein (270aa)
Putative ABC transporter ATP-binding protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H956_ACTM4
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64880.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
putative ABC transporter ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_286_24
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19742..20569)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI00036267D0
integral membrane protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAC68238.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_286_25
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20566..21105)
DNA (540bp) protein (180aa)
RNA polymerase sigma24 factor Tax=Amycolatopsis alba RepID=UPI00037D4D46
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFZ79631.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
Conserved putative membrane protein
PLM1_60_b1_redo_sep16_scaffold_286_26
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21278..21859
DNA (582bp) protein (194aa)
Uncharacterized protein, copper resistance protein CopC-like protein Tax=Frankia sp. QA3 RepID=I8ZVY7_9ACTO
Uncharacterized protein, copper resistance protein CopC-like protein {ECO:0000313|EMBL:EIV91206.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
copper resistance protein CopC
PLM1_60_b1_redo_sep16_scaffold_286_27
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21871..23700
DNA (1830bp) protein (610aa)
copper resistance protein CopD Tax=Salinispora pacifica RepID=UPI0003646BE4
copper resistance D domain-containing protein
Copper resistance D domain protein {ECO:0000313|EMBL:ABV96121.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_286_28
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23732..24910)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PXA3_STANL
Uncharacterized protein {ECO:0000313|EMBL:KIX48053.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
major facilitator superfamily protein
PLM1_60_b1_redo_sep16_scaffold_286_29
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24994..25857
DNA (864bp) protein (288aa)
Redoxin Tax=Streptomyces sp. C RepID=D9VQR7_9ACTO
HxlR family transcriptional regulator {ECO:0000313|EMBL:KJK52530.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
HxlR family transcriptional regulator
Displaying items 1-30 of 63 in total

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