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PLM1_60_b1_redo_sep16_scaffold_1169

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1169_1
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..2264
DNA (2262bp) protein (754aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
helicase Tax=Salinispora pacifica RepID=UPI000376332D
recombinase D
PLM1_60_b1_redo_sep16_scaffold_1169_2
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2261..2584
DNA (324bp) protein (108aa)
Putative uncharacterized protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H4C6_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY61687.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
protein of unknown function DUF323
PLM1_60_b1_redo_sep16_scaffold_1169_3
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2925..5093
DNA (2169bp) protein (723aa)
TPR repeat-containing protein Tax=Amycolatopsis mediterranei RepID=I7DR41_AMYMS
FOG: TPR repeat {ECO:0000313|EMBL:CEL22916.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
TPR repeat-containing protein
PLM1_60_b1_redo_sep16_scaffold_1169_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(5184..6314)
DNA (1131bp) protein (377aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ACZ38038.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ACZ38038.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
4-hydroxybenzoate 3-monooxygenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1C1_SPHTD
PLM1_60_b1_redo_sep16_scaffold_1169_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6628..7998
DNA (1371bp) protein (457aa)
Extracellular endochitinase D {ECO:0000313|EMBL:CCH16994.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CCH16994.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
glycoside hydrolase family 18 Tax=Catelliglobosispora koreensis RepID=UPI00036014F8
chitinase
PLM1_60_b1_redo_sep16_scaffold_1169_6
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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8306..9238
DNA (933bp) protein (311aa)
Uncharacterized protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8XHQ7_STREN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM1_60_b1_redo_sep16_scaffold_1169_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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9235..10002
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Streptomycetaceae bacterium MP113-05 RepID=V6JMZ4_9ACTO
ABC transporter
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_1169_8
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10038..11411)
DNA (1374bp) protein (458aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035DCB5C
PLM1_60_b1_redo_sep16_scaffold_1169_9
unknown

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comp(11541..12050)
DNA (510bp) protein (170aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1169_10
actinobacterium SCGC AAA027-L06, Actinobacteria, Actinobacteria, Bacteria

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12212..13882
DNA (1671bp) protein (557aa)
hypothetical protein Tax=actinobacterium SCGC AAA027-J17 RepID=UPI000381E478
Putative glycosyl hydrolase {ECO:0000313|EMBL:EJX36526.1}; Flags: Precursor;; species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC AAA027-L06.;"
glycoside hydrolase family protein
PLM1_60_b1_redo_sep16_scaffold_1169_11
unknown

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comp(13961..14995)
DNA (1035bp) protein (345aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1169_12
unknown

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comp(15197..15496)
DNA (300bp) protein (100aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1169_13
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(15618..15875)
DNA (258bp) protein (86aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI000379522C
Putative uncharacterized protein {ECO:0000313|EMBL:EGE45791.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus XylebKG-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1169_14
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16138..18408)
DNA (2271bp) protein (757aa)
Uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SCM4_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV81484.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_1169_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(18414..19616)
DNA (1203bp) protein (401aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000373D61F
Uncharacterized protein {ECO:0000313|EMBL:CEL22671.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
Displaying 15 items

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