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PLM1_60_b1_redo_sep16_scaffold_1289

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1289_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1289_2
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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424..2058
DNA (1635bp) protein (545aa)
endo-1,3-beta-glucanase Tax=Kribbella catacumbae RepID=UPI000375F814
Endo-1,3-beta-glucanase {ECO:0000313|EMBL:EME59962.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
1,3-beta-glucanase
PLM1_60_b1_redo_sep16_scaffold_1289_3
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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2078..3184
DNA (1107bp) protein (369aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi
protein of unknown function DUF1006
Tax=RBG_16_Chloroflexi_54_18_curated
PLM1_60_b1_redo_sep16_scaffold_1289_4
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(3190..4215)
DNA (1026bp) protein (342aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Micromonospora sp. ATCC 39149 RepID=C4RPK9_9ACTO
PLM1_60_b1_redo_sep16_scaffold_1289_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4264..5145)
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
4-hydroxy-tetrahydrodipicolinate synthase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYJ0_STRRD
dihydrodipicolinate synthase family protein
PLM1_60_b1_redo_sep16_scaffold_1289_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5216..6097
DNA (882bp) protein (294aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI000365E924
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CAM00949.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_1289_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6105..6560)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8L1_9ACTO
Aminotransferase {ECO:0000313|EMBL:KHD75023.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1289_8
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6603..7415)
DNA (813bp) protein (271aa)
hydrolase Tax=Streptomyces sp. FxanaC1 RepID=UPI00037EE017
Hydrolase {ECO:0000313|EMBL:EXU92626.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
hydrolase
PLM1_60_b1_redo_sep16_scaffold_1289_9
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7508..8845
DNA (1338bp) protein (446aa)
GntR family transcriptional regulator fused with aminotransferase Tax=Streptomyces auratus AGR0001 RepID=J2K6P3_9ACTO
GntR family transcriptional regulator fused with aminotransferase {ECO:0000313|EMBL:EJJ08518.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
GntR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1289_10
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8973..10760
DNA (1788bp) protein (596aa)
PA14 domain protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P2L3_STRVO
Alpha-L-fucosidase {ECO:0000313|EMBL:KJK51809.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
PA14 domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1289_11
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10757..11485)
DNA (729bp) protein (243aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036DDFCE
transcription regulator ArsR
Transcription regulator ArsR {ECO:0000313|EMBL:AJC57778.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM1_60_b1_redo_sep16_scaffold_1289_12
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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11527..12294
DNA (768bp) protein (256aa)
Cytochrome P450 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4S6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK37871.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
cytochrome P450
PLM1_60_b1_redo_sep16_scaffold_1289_13
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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12291..13073
DNA (783bp) protein (261aa)
PEP phosphonomutase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W1V0_9ACTO
PEP phosphonomutase
PEP phosphonomutase {ECO:0000313|EMBL:AGZ43074.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_1289_14
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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13132..13602
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AEM1_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97596.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1289_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13604..14005)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN55_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:EXG80352.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1289_16
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14110..14652
DNA (543bp) protein (181aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000363AF18
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CAM01789.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_1289_17
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14645..15364)
DNA (720bp) protein (240aa)
hypothetical protein Tax=Streptomyces violaceoniger RepID=UPI0003C75725
Secreted protein {ECO:0000313|EMBL:EFH31606.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1289_18
unknown

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comp(15392..15682)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1289_19
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15770..18190
DNA (2421bp) protein (807aa)
beta-mannosidase (EC:3.2.1.25)
Beta-mannosidase {ECO:0000313|EMBL:ADL44844.1}; EC=3.2.1.25 {ECO:0000313|EMBL:ADL44844.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Beta-mannosidase Tax=Micromonospora sp. (strain L5) RepID=E8S7K2_MICSL
PLM1_60_b1_redo_sep16_scaffold_1289_20
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18206..18532
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4R6D9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK28692.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_1289_21
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18537..19325)
DNA (789bp) protein (263aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00035FC905
Kitasatospora griseola strain MF730-N6 RKJC_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ66859.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1289_22
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19453..20025
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHF5_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45127.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_60_b1_redo_sep16_scaffold_1289_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20157..21329)
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWK6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87002.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1289_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21396..22376
DNA (981bp) protein (327aa)
DeoR family transcriptional regulator Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWK7_STRRD
DeoR family transcriptional regulator
DeoR family transcriptional regulator {ECO:0000313|EMBL:ACZ87003.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1289_25
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22414..22791
DNA (378bp) protein (126aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037D06E5
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KJK33155.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
cysteine transferase
PLM1_60_b1_redo_sep16_scaffold_1289_26
unknown

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comp(23002..23379)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1289_27
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23503..23877
DNA (375bp) protein (125aa)
hypothetical protein Tax=Sciscionella marina RepID=UPI00036CA86A
Uncharacterized protein {ECO:0000313|EMBL:KIA60463.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
putative transposase
Displaying 27 items

View Taxonomy