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PLM4_90_coex_sep16_scaffold_2513

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_2513_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..216
DNA (216bp) protein (72aa)
glutamate synthase (NADPH) (EC:1.4.1.13)
Glutamate synthase (NADPH) Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVY4_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_2513_2

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comp(369..782)
DNA (414bp) protein (138aa)
PilT protein domain protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEW5_9BACT
Marine sediment metagenome DNA, contig: S12H4_C03264 {ECO:0000313|EMBL:GAI65254.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PilT protein domain-containing protein
PLM4_90_coex_sep16_scaffold_2513_3
Coprothermobacter proteolyticus, Coprothermobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(760..1014)
DNA (255bp) protein (85aa)
Ribbon-helix-helix protein, CopG family Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y6F5_COPPD
CopG family transcriptional regulator
Ribbon-helix-helix protein, CopG family {ECO:0000313|EMBL:ACI17454.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermodesulfobiaceae; Coprothermobacter.;" source="Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT).;"
PLM4_90_coex_sep16_scaffold_2513_4
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1230..2258)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YGL2_9DELT
transposase of ISPca5, Y1_Tnp domain-containing
Tax=RBG_13_Deltaproteobacteria_49_15_curated
PLM4_90_coex_sep16_scaffold_2513_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2406..3011)
DNA (606bp) protein (202aa)
Metallophosphoesterase bin=GWA2_OP3_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
calcineurin-like phosphoesterase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_2513_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3011..3415)
DNA (405bp) protein (135aa)
rkpK; UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) (EC:1.1.1.22) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_2513_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3412..4218)
DNA (807bp) protein (269aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PAK4_DEFDS
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_2513_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4215..5066)
DNA (852bp) protein (284aa)
dTDP-4-dehydrorhamnose reductase bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
rmlD; dTDP-4-dehydrorhamnose reductase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_2513_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5499..7082)
DNA (1584bp) protein (528aa)
AMP-binding enzyme Tax=delta proteobacterium NaphS2 RepID=D8F0S7_9DELT
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_2513_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7101..8432)
DNA (1332bp) protein (444aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI000363315E
FAD/FMN-dependent dehydrogenase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 10 items

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