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PLM4_90_coex_sep16_scaffold_50

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_50_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..748)
DNA (747bp) protein (249aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B51B38
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1141..1443)
DNA (303bp) protein (101aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_3
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(1459..2319)
DNA (861bp) protein (287aa)
type 11 methyltransferase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin1_lowGC organism_group=Unknown_CP
type 11 methyltransferase
Tax=CG_Dehalo_02
PLM4_90_coex_sep16_scaffold_50_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2338..2631)
DNA (294bp) protein (98aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003764DCF
AbrB family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2942..3739
DNA (798bp) protein (266aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z216_9GAMM
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3759..4085
DNA (327bp) protein (109aa)
Acyl-CoA dehydrogenase domain protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVR9_DESOH
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4082..4897
DNA (816bp) protein (272aa)
Short-chain specific acyl-CoA dehydrogenase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FFY9_DESAA
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4931..5797
DNA (867bp) protein (289aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short chain dehydrogenase/reductase family oxidoreductase bin=GWC2_Syntrophobacterales_56_13 species=Streptomyces griseoflavus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_50_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5858..6838)
DNA (981bp) protein (327aa)
Bacterial transcription activator, effector binding domain protein Tax=delta proteobacterium NaphS2 RepID=D8FEV4_9DELT
AraC family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7102..8511
DNA (1410bp) protein (470aa)
Metallo-beta-lactamase domain protein Tax=delta proteobacterium NaphS2 RepID=D8EYA2_9DELT
RNA-metabolising metallo-beta-lactamase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8868..10427)
DNA (1560bp) protein (520aa)
FAD dependent oxidoreductase Tax=Desulfococcus multivorans DSM 2059 RepID=S7UX96_DESML
glpA; glycerol-3-phosphate dehydrogenase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_12
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10424..11245)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000370C2F7
glycerophosphoryl diester phosphodiesterase
Tax=RBG_13_Ignavibacteria_36_8_curated
PLM4_90_coex_sep16_scaffold_50_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11449..12972
DNA (1524bp) protein (508aa)
glycerol kinase Tax=Desulfovibrio oxyclinae RepID=UPI000373C48F
glycerol kinase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_14
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

13540..14640
DNA (1101bp) protein (367aa)
toluene ABC transporter ATP-binding protein (EC:3.6.3.19)
ABC transporter Tax=Desulfospira joergensenii RepID=UPI0003B3824D
Tax=RBG_16_Spirochaetes_49_21_curated
PLM4_90_coex_sep16_scaffold_50_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14843..15733
DNA (891bp) protein (297aa)
sugar ABC transporter ATP-binding protein (EC:3.6.3.30)
ABC transporter ATP-binding protein Tax=Desulfospira joergensenii RepID=UPI0003B4C3F8
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15747..16619
DNA (873bp) protein (291aa)
ABC transporter, permease protein Tax=delta proteobacterium NaphS2 RepID=D8FF16_9DELT
malK; protein MalK
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16616..17419
DNA (804bp) protein (268aa)
ABC transporter, permease protein Tax=delta proteobacterium NaphS2 RepID=D8FF15_9DELT
Binding-protein-dependent transport systems inner membrane component
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_18
unknown

Not on your lists

comp(17383..17571)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_50_19
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

17931..19685
DNA (1755bp) protein (585aa)
ABC transporter substrate-binding protein Tax=Desulfospira joergensenii RepID=UPI0003B781D9
malE; protein MalE
Tax=RBG_16_Spirochaetes_49_21_curated
PLM4_90_coex_sep16_scaffold_50_20
unknown

Not on your lists

20132..20290
DNA (159bp) protein (53aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_50_21
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20319..22115
DNA (1797bp) protein (599aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYI2_ANATU
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
PLM4_90_coex_sep16_scaffold_50_22
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22211..22477)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C337_DESTA
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_50_23
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22576..23940)
DNA (1365bp) protein (455aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003806D9C
pyridoxal-phosphate dependent TrpB-like enzyme
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_24
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24353..24988)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8FA19_9DELT
transglutaminase-like enzyme, predicted cysteine protease
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_50_25
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24993..25751)
DNA (759bp) protein (253aa)
Sirtuin (Silent mating type information regulation 2 homolog) 6 (S. cerevisiae) Tax=Danio rerio RepID=A8E5H0_DANRE
Sir2 family NAD-dependent deacetylase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying 25 items

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