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PLM4_90_coex_sep16_scaffold_217

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_217_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..691)
DNA (690bp) protein (230aa)
N-acetylmuramyl-L-alanine amidase Tax=Geobacter sulfurreducens RepID=D7AJQ2_GEOSK
N-acetylmuramyl-L-alanine amidase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..3518)
DNA (2754bp) protein (918aa)
pilQ; type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ bin=GWC2_NOV_55_46 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
type IV pilus secretin PilQ
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3515..4078)
DNA (564bp) protein (188aa)
Type IV pilus assembly lipoprotein PilP Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2N3_PELCD
pilP; type IV pilus assembly lipoprotein PilP
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4098..4697)
DNA (600bp) protein (200aa)
Pilus assembly protein PilO Tax=Geobacter sp. (strain M21) RepID=C6E0S9_GEOSM
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4707..5246)
DNA (540bp) protein (180aa)
Fimbrial assembly family protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZSX8_DESOH
fimbrial assembly family protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5248..6306)
DNA (1059bp) protein (353aa)
pilus assembly protein PilM
Type IV pilus biogenesis ATPase PilM bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6410..7795)
DNA (1386bp) protein (462aa)
NtrC family two-component response regulator Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MKG4_9BACT
sigma-54-dependent transcriptional response regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7782..8846)
DNA (1065bp) protein (355aa)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Caldithrix abyssi DSM 13497 RepID=H1XY93_9BACT
multi-sensor signal transduction histidine kinase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8868..10229)
DNA (1362bp) protein (454aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..10849)
DNA (621bp) protein (207aa)
Gliding motility protein (MglA) Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF17_SYNFM
gliding motility protein MglA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10860..11273)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0F2_DESTA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11400..12422)
DNA (1023bp) protein (341aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEW3_CHLTF
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_217_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12449..12607)
DNA (159bp) protein (53aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 13 items

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