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PLM4_90_coex_sep16_scaffold_417

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_417_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..725)
DNA (723bp) protein (241aa)
RNA polymerase sigma factor Tax=Desulfococcus multivorans DSM 2059 RepID=S7TBQ4_DESML
putative RNA polymerase, sigma 70 family subunit
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1060..2457
DNA (1398bp) protein (466aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase (EC:3.5.1.108)
UDP-3-O-acyl-N-acetylglucosamine deacetylase bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2461..3357)
DNA (897bp) protein (299aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4J7_GEODF
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3583..5313
DNA (1731bp) protein (577aa)
tungsten-containing aldehyde ferredoxin:oxidoreductase (EC:1.2.7.5)
Putative tungsten-containing aldehyde:ferredoxin oxidoreductase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NII8_DESTT
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5326..5565
DNA (240bp) protein (80aa)
ThiS-like protein Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0ND28_DESTT
ThiS-like protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5594..5869
DNA (276bp) protein (92aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_trna_1
unknown

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6314..6386
DNA (73bp)
transferRNA Ala
PLM4_90_coex_sep16_scaffold_417_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6925..7737
DNA (813bp) protein (271aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Desulfobacter postgatei 2ac9 RepID=I5B7F5_9DELT
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_8
bacterium UASB14, Bacteria

Not on your lists

7747..8415
DNA (669bp) protein (223aa)
Thiopurine S-methyltransferase, putative Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C356_ACAM1
Thiopurine S-methyltransferase, putative {ECO:0000313|EMBL:GAK51173.1}; species="Bacteria.;" source="bacterium UASB14.;"
tpm; thiopurine S-methyltransferase
PLM4_90_coex_sep16_scaffold_417_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8516..9685)
DNA (1170bp) protein (390aa)
dol:Dole_1554 L-carnitine dehydratase/bile acid-inducible protein F; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
formyl-CoA transferase (EC:2.8.3.16)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9974..11290
DNA (1317bp) protein (439aa)
Extracellular ligand-binding receptor Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBN8_DESAA
extracellular ligand-binding receptor
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11522..12844
DNA (1323bp) protein (441aa)
Extracellular ligand-binding receptor Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBN8_DESAA
extracellular ligand-binding receptor
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13033..13662
DNA (630bp) protein (210aa)
hypothetical protein bin=bin3_NC10 species=Desulfovibrio longus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13764..14828
DNA (1065bp) protein (355aa)
Magnesium and cobalt transporter protein Tax=planctomycete KSU-1 RepID=I3IJA4_9PLAN
magnesium and cobalt transport protein CorA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_14
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14836..15279
DNA (444bp) protein (148aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTS6_SYNAS
cytoplasmic protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_417_15
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15242..15736)
DNA (495bp) protein (165aa)
Metallo-beta-lactamase superfamily
Metallo-beta-lactamase superfamily bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_417_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15729..17717)
DNA (1989bp) protein (663aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1WW12_9BACT
competence protein ComEC
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_417_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17714..17875)
DNA (162bp) protein (54aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 18 items

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