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PLM4_90_coex_sep16_scaffold_428

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_428_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..560
DNA (558bp) protein (186aa)
id=4941762 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(570..1379)
DNA (810bp) protein (270aa)
Ppx/GppA phosphatase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDE0_ANASK
Ppx/GppA phosphatase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1699..1944
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F6S6_9DELT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_428_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2096..3094
DNA (999bp) protein (333aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aminopeptidase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_428_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3104..3886)
DNA (783bp) protein (261aa)
TIM barrel protein, AP endonuclease family 2/xylose isomerase-like family Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EEJ9_GEOBB
TIM barrel protein, AP endonuclease family 2/xylose isomerase-like family
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3883..4932)
DNA (1050bp) protein (350aa)
TrkA-N domain protein bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
potassium transporter TrkA
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5038..5682
DNA (645bp) protein (215aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SK55_THEM7
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_428_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5814..8840
DNA (3027bp) protein (1009aa)
putative sensor histidine kinase (EC:2.7.13.3)
Putative Sensor histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PHQ1_9BACT
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8858..9412
DNA (555bp) protein (185aa)
Two component transcriptional regulator, LuxR family bin=GWB2_Ignavibacteria_35_12 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
response regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9604..9966
DNA (363bp) protein (121aa)
Response regulator receiver protein bin=GWC2_Spirochaete_52_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
response regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10130..11557
DNA (1428bp) protein (476aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
HD-GYP domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11835..13163
DNA (1329bp) protein (443aa)
hypothetical protein
hypothetical protein bin=GWC2_NOV_55_46 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13163..13924
DNA (762bp) protein (254aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUU8_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13940..14989
DNA (1050bp) protein (350aa)
Uncharacterized protein involved in formation of curli polymers-like protein bin=GWB2_Deltaproteobacteria_65_81 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15349..16491
DNA (1143bp) protein (381aa)
Benzoyl-CoA reductase, gamma subunit Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQE4_9BACT
benzoyl-CoA reductase, bzd-type, N subunit
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16518..17849
DNA (1332bp) protein (444aa)
Benzoyl-CoA reductase, beta subunit bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
benzoyl-CoA reductase, bzd-type, O subunit
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_428_17
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17918..18739
DNA (822bp) protein (274aa)
Benzoyl coa reductase, alpha subunit bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
bcrD; benzoyl CoA reductase subunit
Tax=RBG_13_Deltaproteobacteria_52_11_curated
Displaying 17 items

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