ggKbase home page

PLM4_90_coex_sep16_scaffold_1295

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1295_1
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1056
DNA (1056bp) protein (352aa)
Uncharacterized protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
glycosyl transferase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1295_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1074..1331
DNA (258bp) protein (86aa)
translation elongation factor-like protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_coex_sep16_scaffold_1295_3
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1347..2429
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IK93_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_90_coex_sep16_scaffold_1295_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2969..4294
DNA (1326bp) protein (442aa)
ATPase bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
rarA; polynucleotide enzyme with nucleotide triphosphate hydrolase domain
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1295_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4270..4770
DNA (501bp) protein (167aa)
id=3240561 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1295_6
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4767..6032
DNA (1266bp) protein (422aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PHP domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1295_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6094..6354
DNA (261bp) protein (87aa)
Antitoxin of YafQ-DinJ toxin-antitoxin system Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLB7_9BACT
dinJ; antitoxin of YafQ-DinJ toxin-antitoxin system
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1295_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6354..6623
DNA (270bp) protein (90aa)
Addiction module toxin, RelE/StbE family Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6STC3_9DELT
yafQ; toxin of the YafQ-DinJ toxin-antitoxin system
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1295_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

6657..6902
DNA (246bp) protein (82aa)
hypothetical protein Tax=Spirulina subsalsa RepID=UPI0002F8412C
DNA polymerase subunit beta
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ABU56225.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM4_90_coex_sep16_scaffold_1295_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6981..7271
DNA (291bp) protein (97aa)
DNA polymerase beta domain protein region Tax=Cyanothece RepID=B7JWB3_CYAP8
DNA polymerase beta domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1295_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7268..7414
DNA (147bp) protein (49aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 11 items

View Taxonomy