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PLM4_90_coex_sep16_scaffold_1440

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1440_1
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1083
DNA (1083bp) protein (361aa)
ResB-like protein Tax=delta proteobacterium NaphS2 RepID=D8FDG1_9DELT
heme export protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1440_2
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1173..2000
DNA (828bp) protein (276aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1440_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2034..2348
DNA (315bp) protein (105aa)
Integration host factor beta-subunit bin=GWA1_Deltaproteobacteria_52_35 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
histone family protein DNA-binding protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1440_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2371..3267)
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YIH8_9DELT
histone deacetylase superfamily
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1440_5
Riptortus pedestris, Riptortus, Hemiptera, Neoptera, Arthropoda, Metazoa

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comp(3284..3637)
DNA (354bp) protein (118aa)
Protein phosphatases pp1 regulatory subunit Tax=Riptortus pedestris RepID=R4WRK4_9HEMI
Protein phosphatases pp1 regulatory subunit {ECO:0000313|EMBL:BAN20537.1}; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Euhemiptera; Heteroptera; Panheteroptera; Pentatomomorpha; Coreoidea; Alydidae; Riptortus.;" source="Riptortus pedestris.;"
hypothetical protein
PLM4_90_coex_sep16_scaffold_1440_6
unknown

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comp(3627..3818)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_1440_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3870..4610)
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl carrier protein) reductase Tax=Geobacter sulfurreducens RepID=D7AF00_GEOSK
3-oxoacyl-ACP reductase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1440_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4913..6304)
DNA (1392bp) protein (464aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7J4_GEOUR
radical SAM protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1440_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6673..7914)
DNA (1242bp) protein (414aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMQ4_9FIRM
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1440_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7914..9059)
DNA (1146bp) protein (382aa)
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KLG0_9FIRM
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1440_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9779..9994
DNA (216bp) protein (72aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZR9_DESTA
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 11 items

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