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PLM4_90_coex_sep16_scaffold_1875

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1875_1

Not on your lists

comp(3..440)
DNA (438bp) protein (146aa)
Marine sediment metagenome DNA, contig: S01H4_S12488 {ECO:0000313|EMBL:GAG95263.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=2706376 bin=GWF2_Lentisphaerae_57_35 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
PLM4_90_coex_sep16_scaffold_1875_2
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(481..765)
DNA (285bp) protein (95aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1875_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(934..1620)
DNA (687bp) protein (229aa)
SAM-dependent methlyltransferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B69A55
ubiquinone/menaquinone biosynthesis methyltransferase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1875_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1629..2819)
DNA (1191bp) protein (397aa)
Iron-sulfur cluster-binding protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AFR5_CARHZ
(Fe-S)-binding protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1875_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2821..3846)
DNA (1026bp) protein (342aa)
Fe-S oxidoreductase Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5F8_KORCO
Fe-S oxidoreductase
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1875_6
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(4155..4520)
DNA (366bp) protein (122aa)
membrane protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B7877E
aminopeptidase
Aminopeptidase C, putative {ECO:0000313|EMBL:AAM72805.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
PLM4_90_coex_sep16_scaffold_1875_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4962..5081)
DNA (120bp) protein (40aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1875_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5126..6325)
DNA (1200bp) protein (400aa)
Cobalamin B12-binding domain-containing protein Tax=Methanobacterium formicicum DSM 3637 RepID=K2QEA8_METFO
Fe-S oxidoreductase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_coex_sep16_scaffold_1875_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6341..7603)
DNA (1263bp) protein (421aa)
Peptidase, U32 superfamily bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1875_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7984..8319
DNA (336bp) protein (112aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1875_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8432..9163)
DNA (732bp) protein (244aa)
ABC transporter, ATP-binding protein Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J278_9BACL
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1875_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9129..9902)
DNA (774bp) protein (258aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter-like protein Tax=Janthinobacterium sp. HH01 RepID=L9P9U5_9BURK
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1875_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9899..10597)
DNA (699bp) protein (233aa)
Branched-chain amino acid ABC transporter, membrane protein Tax=Geobacter metallireducens RepID=Q39UM4_GEOMG
branched-chain amino acid ABC transporter permease
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 13 items

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