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PLM4_5_b1_sep16_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_226_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..262
DNA (261bp) protein (87aa)
hypothetical protein Tax=Limnohabitans sp. Rim47 RepID=UPI00030009A8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_226_2
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329..895
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Osedax symbiont Rs1 RepID=S6GFF0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ46300.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
rdd domain-containing protein
PLM4_5_b1_sep16_scaffold_226_3
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(946..1395)
DNA (450bp) protein (150aa)
glyoxalase Tax=Bacillus acidiproducens RepID=UPI00037A06CE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AIJ22147.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM4_5_b1_sep16_scaffold_226_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1536..1784)
DNA (249bp) protein (83aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Thauera phenylacetica B4P RepID=N6Z2D5_9RHOO
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_226_5
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1798..2628)
DNA (831bp) protein (277aa)
benzoyl-CoA reductase subunit D (EC:1.3.7.8)
Benzoyl-CoA reductase, subunit D Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I4X6_RHOVT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_226_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2625..3947)
DNA (1323bp) protein (441aa)
Benzoyl-CoA reductase subunit A Tax=Magnetospirillum sp. SO-1 RepID=M2ZRJ1_9PROT
2-hydroxyglutaryl-CoA dehydratase activator protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_226_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3950..5275)
DNA (1326bp) protein (442aa)
benzoyl-CoA reductase subunit B (EC:1.3.7.8)
Benzoyl-CoA reductase subunit B Tax=Thauera aromatica RepID=BCRB_THAAR
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_226_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5272..6438)
DNA (1167bp) protein (389aa)
benzoyl-CoA reductase subunit C (EC:1.3.7.8)
Benzoyl-CoA reductase subunit C Tax=Thauera phenylacetica B4P RepID=N6YUT8_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6435..7205)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003826248
cyclohexa-1,5-dienecarbonyl-CoA hydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_226_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7198..8307)
DNA (1110bp) protein (370aa)
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I4X1_RHOVT
6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_11
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8434..10137
DNA (1704bp) protein (568aa)
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit Tax=Azoarcus sp. KH32C RepID=H0PU91_9RHOO
korA; 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_12
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10122..10967
DNA (846bp) protein (282aa)
2-oxoglutarate ferredoxin-oxidoreductase beta subunit Tax=Thauera aromatica RepID=Q8RJQ9_THAAR
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10976..11455
DNA (480bp) protein (160aa)
Rubrerythrin Tax=Thauera phenylacetica B4P RepID=N6Z2C7_9RHOO
rubrerythrin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_14
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11452..11853
DNA (402bp) protein (134aa)
Putative translation initiation inhibitor Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5C3_MAGSA
putative translation initiation inhibitor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_226_15
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11850..12551
DNA (702bp) protein (234aa)
2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UB2_CUPPJ
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12563..12994)
DNA (432bp) protein (144aa)
Putative signal-transduction protein with CBS domains Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221B5_RHOFD
signal-transduction protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13076..14143)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI00037F25D6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_18
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14089..14331)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Thauera RepID=N6YK51_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_226_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14487..14792
DNA (306bp) protein (102aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_226_20
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14959..17091
DNA (2133bp) protein (711aa)
Anaerobic ribonucleoside-triphosphate reductase Tax=Desulfovibrio fructosivorans JJ RepID=E1K2N8_DESFR
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EFL49127.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
nrdD; anaerobic ribonucleoside triphosphate reductase
PLM4_5_b1_sep16_scaffold_226_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17070..17633
DNA (564bp) protein (188aa)
Putative pyruvate radical-activating enzyme bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
anaerobic ribonucleoside-triphosphate reductase activating protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_22
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(17672..19330)
DNA (1659bp) protein (553aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
Carboxylesterase type B Tax=uncultured candidate division OP1 bacterium RepID=H5SRL9_9BACT
carboxylesterase
PLM4_5_b1_sep16_scaffold_226_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19478..20596)
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Caldimonas manganoxidans RepID=UPI0003791BC4
2-nitropropane dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20599..21438)
DNA (840bp) protein (280aa)
Siroheme synthase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSG9_SIDLE
uroporphyrin-III C-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..21847
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR94_ACCPU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_226_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21844..22992
DNA (1149bp) protein (383aa)
Putative heme D1 biosynthesis protein NirF Tax=uncultured bacterium 2303 RepID=B8R917_9BACT
cytochrome d1 heme region
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_226_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22994..23941
DNA (948bp) protein (316aa)
AsnC family transcriptional regulator Tax=Thauera RepID=N6Y6Y8_9RHOO
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23934..24377
DNA (444bp) protein (148aa)
hypothetical protein Tax=Cupriavidus sp. WS RepID=UPI00036CF839
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24374..24844
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AY4_DECAR
AsnC family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_226_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24846..25988
DNA (1143bp) protein (381aa)
Putative heme D1 biosynthesis protein NirJ Tax=uncultured bacterium 2303 RepID=B8R921_9BACT
heme d1 biosynthesis radical SAM protein NirJ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Displaying items 1-30 of 60 in total

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