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PLM4_5_b1_sep16_scaffold_989

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_989_1
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1809)
DNA (1809bp) protein (603aa)
acnA; aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase Tax=Burkholderia sp. SJ98 RepID=K8R2S2_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_989_2
unknown

Not on your lists

comp(1821..2246)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_989_3
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2249..3676)
DNA (1428bp) protein (476aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase Tax=Uliginosibacterium gangwonense RepID=UPI00036BB20E
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_989_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3676..4278)
DNA (603bp) protein (201aa)
Isoprenylcysteine carboxyl methyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_989_5
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4275..4472)
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P3L7_AROAE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_6
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4475..5626)
DNA (1152bp) protein (384aa)
methylcitrate synthase (EC:2.3.3.5)
Methylcitrate synthase Tax=Ralstonia pickettii DTP0602 RepID=U3QMR2_RALPI
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_989_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6476)
DNA (876bp) protein (292aa)
prpB; 2-methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase Tax=Ralstonia solanacearum CFBP2957 RepID=D8NSG3_RALSL
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_989_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6473..7468)
DNA (996bp) protein (332aa)
malate dehydrogenase; K00024 malate dehydrogenase [EC:1.1.1.37] bin=BACIGN_2 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=BACIGN_2 organism_group=Unknown_CP
mdh; malate dehydrogenase (EC:1.1.1.37)
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7612..7794
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_989_10
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..9095
DNA (1290bp) protein (430aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase Tax=Herbaspirillum sp. YR522 RepID=J3HW02_9BURK
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9103..11985
DNA (2883bp) protein (961aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component Tax=Nitrosospira sp. APG3 RepID=M5DT05_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11975..13168
DNA (1194bp) protein (398aa)
sucB; 2-oxoglutarate dehydrogenase E2 (EC:2.3.1.61)
2-oxoglutarate dehydrogenase E2 component (Dihydrolipoamide succinyltransferase) Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SY56_JANMA
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_13
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..15158
DNA (642bp) protein (214aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI000367A88E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM4_5_b1_sep16_scaffold_989_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15409..16302
DNA (894bp) protein (298aa)
Zinc-containing alcohol dehydrogenase superfamily Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GS3_DECAR
zinc-containing alcohol dehydrogenase superfamily protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_15
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16299..18191
DNA (1893bp) protein (631aa)
Propionyl-CoA synthetase Tax=Thauera phenylacetica B4P RepID=N6YR20_9RHOO
prpE; propionyl-CoA synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_989_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18188..18595
DNA (408bp) protein (136aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_989_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18667..19140
DNA (474bp) protein (158aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium sp. genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_989_18
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19145..20278)
DNA (1134bp) protein (378aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000381FEB1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_989_19
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20307..21215)
DNA (909bp) protein (303aa)
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
Isopropylmalate/homocitrate/citramalate synthase Tax=Variovorax sp. CF313 RepID=J2K9L2_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_989_20
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21357..21584
DNA (228bp) protein (76aa)
Putative addiction module antidote {ECO:0000313|EMBL:KFB71453.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
PLM4_5_b1_sep16_scaffold_989_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21581..21982
DNA (402bp) protein (134aa)
Death-on-curing family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKV9_9BACT
Death-on-curing family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_989_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21979..23151)
DNA (1173bp) protein (391aa)
Putative MFS transporter Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P870_AROAE
MFS transporter
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_989_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23148..24710)
DNA (1563bp) protein (521aa)
fumA; fumarate hydratase (EC:4.2.1.2)
fumarate hydratase Tax=Herbaspirillum sp. JC206 RepID=UPI000318B188
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_989_24
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24762..26732
DNA (1971bp) protein (657aa)
acs; acetate/CoA ligase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase Tax=Sulfuricella denitrificans skB26 RepID=S6ACQ8_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_989_25
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26745..27224
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GM85_THISH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_989_26
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27245..27442
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K2_POLSJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_989_27
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27453..27653
DNA (201bp) protein (67aa)
Histidine kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBY7_ANADF
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_989_28
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27653..28408
DNA (756bp) protein (252aa)
Histidine kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBY7_ANADF
histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
Displaying 28 items

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