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PLM4_5_b1_sep16_scaffold_4557

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4557_1
unknown

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193..366
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4557_2
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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347..733
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RCS3_CUPTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ72698.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
PLM4_5_b1_sep16_scaffold_4557_3
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1060..1923
DNA (864bp) protein (288aa)
Anti-sigma-factor antagonist Tax=Crinalium epipsammum PCC 9333 RepID=K9W6L1_9CYAN
anti-sigma-factor antagonist
Anti-sigma-factor antagonist {ECO:0000313|EMBL:AFZ15407.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM4_5_b1_sep16_scaffold_4557_4
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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1938..2288
DNA (351bp) protein (117aa)
anti-sigma factor antagonist Tax=Mastigocladopsis repens RepID=UPI0002EA836C
Stage II sporulation protein {ECO:0000313|EMBL:EKF00988.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
anti-sigma-factor antagonist
PLM4_5_b1_sep16_scaffold_4557_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2379..2762
DNA (384bp) protein (128aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) Tax=Bradyrhizobium sp. YR681 RepID=J2VXF5_9BRAD
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:EJN10962.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-sigma regulatory factor, serine/threonine protein kinase
PLM4_5_b1_sep16_scaffold_4557_6
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2774..3760
DNA (987bp) protein (329aa)
Anti-sigma regulatory factor (Ser/Thr protein kinase) Tax=Microcoleus sp. PCC 7113 RepID=K9WIR1_9CYAN
anti-sigma regulatory factor
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:AFZ19691.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
PLM4_5_b1_sep16_scaffold_4557_7
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3763..3990
DNA (228bp) protein (76aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADN13265.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM4_5_b1_sep16_scaffold_4557_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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3981..5735
DNA (1755bp) protein (585aa)
histidine kinase Tax=Microchaete sp. PCC 7126 RepID=UPI00036D09A2
Histidine kinase {ECO:0000313|EMBL:KIJ78529.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hybrid histidine kinase
PLM4_5_b1_sep16_scaffold_4557_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5732..8137
DNA (2406bp) protein (802aa)
multi-sensor hybrid histidine kinase Tax=Gemmata obscuriglobus RepID=UPI00016C4C22
hybrid histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_5_b1_sep16_scaffold_4557_10
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8179..8697)
DNA (519bp) protein (173aa)
Putative rare lipoprotein A Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P496_AROAE
rlpA; rare lipoprotein A
Putative rare lipoprotein A {ECO:0000313|EMBL:CAI07867.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
PLM4_5_b1_sep16_scaffold_4557_11
unknown

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8925..9110
DNA (186bp) protein (62aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4557_12
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9112..10020
DNA (909bp) protein (303aa)
hypothetical protein, partial Tax=Herbaspirillum lusitanum RepID=UPI0003663D57
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
Ku domain-containing protein
PLM4_5_b1_sep16_scaffold_4557_13
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10185..12584
DNA (2400bp) protein (800aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI00035EE8EF
DNA ligase {ECO:0000313|EMBL:ESJ25618.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
DNA ligase D
Displaying 13 items

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