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PLM4_5_b1_sep16_scaffold_25198

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_25198_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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2..103
DNA (102bp) protein (34aa)
Amino acid permease-associated region Tax=Geobacter sp. (strain FRC-32) RepID=B9M786_GEOSF bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_25198_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

118..891
DNA (774bp) protein (258aa)
Amino acid permease-associated region Tax=Geobacter sp. (strain FRC-32) RepID=B9M786_GEOSF bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
short-chain dehydrogenase/reductase family oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_25198_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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927..1805
DNA (879bp) protein (293aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B2_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_5_b1_sep16_scaffold_25198_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2075..2809
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7L0_GEOLS bin=16ft_combo_ws3_JS1 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_25198_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3063..4106)
DNA (1044bp) protein (348aa)
FAD dependent oxidoreductase Tax=Anaeromyxobacter RepID=B4UBW8_ANASK bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
FAD dependent oxidoreductase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_25198_6
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4764..5423
DNA (660bp) protein (220aa)
Major facilitator superfamily transporter Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4E4_ANATU
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:BAJ63308.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM4_5_b1_sep16_scaffold_25198_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5513..5764)
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3U8_AZOL4
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_5_b1_sep16_scaffold_25198_8
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5767..5988)
DNA (222bp) protein (74aa)
Uncharacterized protein Tax=Thermus aquaticus Y51MC23 RepID=B7A7P5_THEAQ
Uncharacterized protein {ECO:0000313|EMBL:EED10282.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus Y51MC23.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_25198_9
unknown

Not on your lists

comp(6072..6680)
DNA (609bp) protein (203aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_25198_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6820..7116
DNA (297bp) protein (99aa)
oxidoreductase molybdopterin subunit (EC:1.7.99.4)
Oxidoreductase alpha (Molybdopterin) subunit Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0G0_ROSS1 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 10 items

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