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PLM4_5_b1_sep16_scaffold_1035

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_1035_1
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(2..859)
DNA (858bp) protein (286aa)
proton/peptide symporter family protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Uncharacterized protein {ECO:0000313|EMBL:KDA54473.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
proton/peptide symporter family protein
PLM4_5_b1_sep16_scaffold_1035_2
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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968..2149
DNA (1182bp) protein (394aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5J4_ANATU
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM4_5_b1_sep16_scaffold_1035_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2106..3488)
DNA (1383bp) protein (461aa)
Ferredoxin--NADP(+) reductase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B736_HERA2
ferredoxin-NADP reductase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_1035_4
unknown

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3720..4382
DNA (663bp) protein (221aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_1035_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4460..6283
DNA (1824bp) protein (608aa)
Tetratricopeptide TPR_2 repeat protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEW1_ANASK
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACG75078.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_1035_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6424..8709
DNA (2286bp) protein (762aa)
Oligopeptide transporter, OPT family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0C6_OPITP
OPT family oligopeptide transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_1035_7
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8870..10573
DNA (1704bp) protein (568aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4KXH7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ09878.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
peptidoglycan-binding domain 1 protein
PLM4_5_b1_sep16_scaffold_1035_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(10536..13190)
DNA (2655bp) protein (885aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TY9_SOLUE
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_5_b1_sep16_scaffold_1035_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(13279..14052)
DNA (774bp) protein (258aa)
Di-/tripeptide transporter Tax=Cystobacter fuscus DSM 2262 RepID=L9JJB3_9DELT bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptide ABC transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 9 items

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